Contributors
Audrey P. Gasch:
ORCID: http://orcid.org/0000-0002-8182-257X
Role: ConceptualizationRole: Formal analysisRole: Funding acquisitionRole: InvestigationRole:
Project administrationRole: SupervisionRole: Writing – original draft
Feiqiao Brian Yu: Role: Methodology
James Hose: Role: InvestigationRole: MethodologyRole: Validation
Leah E. Escalante: Role: Formal analysisRole: InvestigationRole: ValidationRole: Writing – review & editing
Mike Place: Role: MethodologyRole: Visualization
Rhonda Bacher: Role: Formal analysisRole: Investigation
Jad Kanbar: Role: Methodology
Doina Ciobanu: Role: Methodology
Laura Sandor: Role: Methodology
Igor V. Grigoriev: Role: Supervision
Christina Kendziorski: Role: Supervision
Stephen R. Quake: Role: Supervision
Megan N. McClean: Role: Formal analysisRole: InvestigationRole: MethodologyRole: SupervisionRole: ValidationRole:
Writing – review & editing
Nathalie Balaban: Role: Academic Editor
Journal
Journal ID (nlm-ta): PLoS Biol
Journal ID (iso-abbrev): PLoS Biol
Journal ID (publisher-id): plos
Journal ID (pmc): plosbiol
Title:
PLoS Biology
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Print):
1544-9173
ISSN
(Electronic):
1545-7885
Publication date
(Electronic):
14
December
2017
Publication date Collection:
December
2017
Publication date PMC-release: 14
December
2017
Volume: 15
Issue: 12
Electronic Location Identifier: e2004050
Affiliations
[1
]
Laboratory of Genetics, University of Wisconsin–Madison, Madison, Wisconsin, United
States of America
[2
]
Great Lakes Bioenergy Research Center, University of Wisconsin–Madison, Madison, Wisconsin,
United States of America
[3
]
Department of Bioengineering, Stanford University, Stanford, California, United States
of America
[4
]
Department of Biostatistics and Medical Informatics, University of Wisconsin–Madison,
Madison, Wisconsin, United States of America
[5
]
Department of Energy Joint Genome Institute, Walnut Creek, California, United States
of America
[6
]
Chan Zuckerberg Biohub, San Francisco, California, United States of America
[7
]
Department of Biomedical Engineering, University of Wisconsin–Madison, Madison, Wisconsin,
United States of America
The Hebrew University of Jerusalem, Israel
Author notes
I have read the journal's policy and the authors of this manuscript have the following
competing interests: SRQ is a co-founder of Fluidigm, whose technology was used as
part of this project.
[¤]
Current address: Department of Medicine, University of California San Diego, La Jolla,
California, United States of America
‡ These authors share first authorship on this work.
Author information
Article
Publisher ID:
pbio.2004050
DOI: 10.1371/journal.pbio.2004050
PMC ID: 5746276
PubMed ID: 29240790
SO-VID: 68fd79dd-29a8-45dd-9c89-54498ef919cc
License:
This is an open access article, free of all copyright, and may be freely reproduced,
distributed, transmitted, modified, built upon, or otherwise used by anyone for any
lawful purpose. The work is made available under the
Creative Commons CC0 public domain dedication.
History
Date
received
: 24
August
2017
Date
accepted
: 17
November
2017
Page count
Figures: 7,
Tables: 0,
Pages: 28
Funding
Burroughs Wellcome (grant number 1011875.01). Career Award at the Scientific Interface.
Department of Energy BER (grant number DE-FC02-07ER64494). NIH (grant number R01GM083989).
Department of Energy (grant number DE-AC02-05CH11231). The funders had no role in
study design, data collection and analysis, decision to publish, or preparation of
the manuscript.
Categories
Subject:
Research Article
Subject:
Biology and Life Sciences
Subject:
Cell Biology
Subject:
Cell Processes
Subject:
Cellular Stress Responses
Subject:
Biology and life sciences
Subject:
Biochemistry
Subject:
Nucleic acids
Subject:
RNA
Subject:
Messenger RNA
Subject:
Biology and Life Sciences
Subject:
Computational Biology
Subject:
Genome Analysis
Subject:
Transcriptome Analysis
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Genomics
Subject:
Genome Analysis
Subject:
Transcriptome Analysis
Subject:
Biology and life sciences
Subject:
Biochemistry
Subject:
Proteins
Subject:
DNA-binding proteins
Subject:
Transcription Factors
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Gene Regulation
Subject:
Transcription Factors
Subject:
Biology and Life Sciences
Subject:
Biochemistry
Subject:
Proteins
Subject:
Regulatory Proteins
Subject:
Transcription Factors
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Eukaryota
Subject:
Fungi
Subject:
Yeast
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Types
Subject:
Regulator Genes
Subject:
Research and Analysis Methods
Subject:
Experimental Organism Systems
Subject:
Model Organisms
Subject:
Saccharomyces Cerevisiae
Subject:
Research and Analysis Methods
Subject:
Model Organisms
Subject:
Saccharomyces Cerevisiae
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Eukaryota
Subject:
Fungi
Subject:
Yeast
Subject:
Saccharomyces
Subject:
Saccharomyces Cerevisiae
Subject:
Research and Analysis Methods
Subject:
Experimental Organism Systems
Subject:
Yeast and Fungal Models
Subject:
Saccharomyces Cerevisiae
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Gene Regulation
Subject:
Transcriptional Control
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