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      Mitohelper: A mitochondrial reference sequence analysis tool for fish eDNA studies

      1 , 2 , 2 , 3
      Environmental DNA
      Wiley

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          The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

          SILVA (from Latin silva, forest, http://www.arb-silva.de) is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services. The referred database release 111 (July 2012) contains 3 194 778 small subunit and 288 717 large subunit rRNA gene sequences. Since the initial description of the project, substantial new features have been introduced, including advanced quality control procedures, an improved rRNA gene aligner, online tools for probe and primer evaluation and optimized browsing, searching and downloading on the website. Furthermore, the extensively curated SILVA taxonomy and the new non-redundant SILVA datasets provide an ideal reference for high-throughput classification of data from next-generation sequencing approaches.
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            Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

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              Matplotlib: A 2D Graphics Environment

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                Author and article information

                Contributors
                (View ORCID Profile)
                (View ORCID Profile)
                Journal
                Environmental DNA
                Environmental DNA
                Wiley
                2637-4943
                2637-4943
                February 12 2021
                Affiliations
                [1 ]Rosenstiel School of Marine and Atmospheric Science Cooperative Institute for Marine and Atmospheric StudiesUniversity of Miami Miami FL USA
                [2 ]Ocean Chemistry and Ecosystems Division Atlantic Oceanographic and Meteorological Laboratory National Oceanic and Atmospheric Administration Miami FL USA
                [3 ]Northern Gulf InstituteMississippi State University Mississippi State MS USA
                Article
                10.1002/edn3.187
                6c2be78a-6822-4a42-bfbe-f58c4e6a2298
                © 2021

                http://creativecommons.org/licenses/by-nc/4.0/

                http://creativecommons.org/licenses/by-nc/4.0/

                http://doi.wiley.com/10.1002/tdm_license_1.1

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