Journal ID (nlm-ta): PLoS One
Journal ID (iso-abbrev): PLoS ONE
Journal ID (publisher-id): plos
Journal ID (pmc): plosone
Title:
PLoS ONE
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Electronic):
1932-6203
Publication date
(Electronic):
12
April
2016
Publication date Collection: 2016
Volume: 11
Issue: 4
Electronic Location Identifier: e0153294
Affiliations
[1
]Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
[2
]Department of Medical Microbiology, University Medical Center Utrecht, Utrecht, The
Netherlands
[3
]KU Leuven, Department of Microbiology and Immunology, Rega Institute, Leuven, Belgium
[4
]VIB, Center for the Biology of Disease, Leuven, Belgium
[5
]Valio Oy, Helsinki, Finland
[6
]Translational Proteomics, Turku Center for Biotechnology, University of Turku and
Åbo Akademi University, Turku, Finland
[7
]Department of Bacteriology and Immunology, Immunobiology Research Program, University
of Helsinki, Helsinki, Finland
[8
]Laboratory of Microbiology, Wageningen University, Wageningen, The Netherlands
University of Illinois, UNITED STATES
Author notes
Competing Interests: The work was partially supported by Valio Ltd, a manufacturer of probiotics; one of
the authors (RAK) is employed by Valio Ltd. This does not alter the authors’ adherence
to all the PLoS ONE policies on sharing data and materials, and the content of this
paper was neither influenced nor constrained by that fact.
Conceived and designed the experiments: WdV CK AS GC. Performed the experiments: CK.
Analyzed the data: CK JS J. Ritari WdV AS J. Raes GF SVS. Contributed reagents/materials/analysis
tools: WdV GC RAK AP MdB. Wrote the paper: CK WdV MdB AS JS GC AP J. Ritari J. Raes
SVS.
[¤]
Current address: Van’t Hoff Institute for Molecular Sciences (HIMS), University of
Amsterdam, Amsterdam, The Netherlands
Article
Publisher ID:
PONE-D-15-05251
DOI: 10.1371/journal.pone.0153294
PMC ID: 4829149
PubMed ID: 27070903
SO-VID: 6d393946-b2c2-41d1-9efe-75fbbfe79fba
Copyright © © 2016 Kolmeder et al
License:
This is an open access article distributed under the terms of the
Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided
the original author and source are credited.
Funded by: Doctoral Programme in Food Chain and Health
Award Recipient
:
Carolin Adriane Kolmeder
Funded by: Suomalainen Tiedeakatemia
Award ID: 141130
Award Recipient
:
Willem M de Vos
Funded by: funder-id http://dx.doi.org/10.13039/501100002342, Suomalainen Tiedeakatemia;
Award ID: 137389
Award Recipient
:
Willem M de Vos
Funded by: funder-id http://dx.doi.org/10.13039/501100002342, Suomalainen Tiedeakatemia;
Award ID: 141140
Award Recipient
:
Willem M de Vos
Funded by: European Research Council
Award ID: 250172
Award Recipient
:
Willem M de Vos
Support was provided by: Doctoral Programme in Food Chain and Health (to CK); Academy
of Finland [
http://www.aka.fi/en-GB/A/] (141130 to WdV, 137389 to WdV, 141140 to WdV); European Research Council [
http://erc.europa.eu/] (250172 to WdV); FP7 [
http://cordis.europa.eu/fp7/home_en.html]; Spinoza award of the Netherlands Organization for Scientific Research [
http://www.nwo.nl/en/research-and-results/programmes/spinoza+prize] (to WdV); METACARDIS HEALTH-F4-2012- 305312 (to J. Raes); IWT-SBO 100016 (to J.
Raes); Marie Curie Actions FP7 People COFUND [
http://cordis.europa.eu/project/rcn/100377_en.html] (Proposal 267139 (acronym OMICS@VIB) to SVS); Research Foundation Flanders (FWO)
[
http://www.fwo.be/en/] (to J. Raes); The Flemish agency for Innovation by Science and Technology (IWT)
http://www.flagera.eu/?q=iwt (to J. Raes); KU Leuven [
http://www.kuleuven.be/english] (to J. Raes); The Rega Institute [
http://rega.kuleuven.be/] (to J. Raes); Biocenter Finland, Turku Proteomics Facility [
http://www.biocenter.fi] (to GC). One of the authors (RAK) is employed by a commercial company (Valio Ltd)
and contributed to the design of the clinical trial.
Subject:
Research Article
Subject:
Biology and Life Sciences
Subject:
Anatomy
Subject:
Digestive System
Subject:
Gastrointestinal Tract
Subject:
Medicine and Health Sciences
Subject:
Anatomy
Subject:
Digestive System
Subject:
Gastrointestinal Tract
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Medical Microbiology
Subject:
Microbiome
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Genomics
Subject:
Microbial Genomics
Subject:
Microbiome
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Microbial Genomics
Subject:
Microbiome
Subject:
Research and Analysis Methods
Subject:
Bioassays and Physiological Analysis
Subject:
Microarrays
Subject:
Biology and Life Sciences
Subject:
Biochemistry
Subject:
Peptides
Subject:
Biology and Life Sciences
Subject:
Evolutionary Biology
Subject:
Evolutionary Systematics
Subject:
Phylogenetics
Subject:
Biology and Life Sciences
Subject:
Taxonomy
Subject:
Evolutionary Systematics
Subject:
Phylogenetics
Subject:
Computer and Information Sciences
Subject:
Data Management
Subject:
Taxonomy
Subject:
Evolutionary Systematics
Subject:
Phylogenetics
Subject:
Biology and life sciences
Subject:
Biochemistry
Subject:
Nucleic acids
Subject:
RNA
Subject:
Non-coding RNA
Subject:
Ribosomal RNA
Subject:
Biology and life sciences
Subject:
Biochemistry
Subject:
Ribosomes
Subject:
Ribosomal RNA
Subject:
Biology and life sciences
Subject:
Cell biology
Subject:
Cellular structures and organelles
Subject:
Ribosomes
Subject:
Ribosomal RNA
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Bacteria
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Probiotics