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      Cardiac myocyte miR-29 promotes pathological remodeling of the heart by activating Wnt signaling

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          Abstract

          Chronic cardiac stress induces pathologic hypertrophy and fibrosis of the myocardium. The microRNA-29 (miR-29) family has been found to prevent excess collagen expression in various organs, particularly through its function in fibroblasts. Here, we show that miR-29 promotes pathologic hypertrophy of cardiac myocytes and overall cardiac dysfunction. In a mouse model of cardiac pressure overload, global genetic deletion of miR-29 or antimiR-29 infusion prevents cardiac hypertrophy and fibrosis and improves cardiac function. Targeted deletion of miR-29 in cardiac myocytes in vivo also prevents cardiac hypertrophy and fibrosis, indicating that the function of miR-29 in cardiac myocytes dominates over that in non-myocyte cell types. Mechanistically, we found cardiac myocyte miR-29 to de-repress Wnt signaling by directly targeting four pathway factors. Our data suggests that, cell- or tissue-specific antimiR-29 delivery may have therapeutic value for pathological cardiac remodeling and fibrosis.

          Abstract

          MicroRNA-29 is known to reduce collagen production in fibroblasts thereby inhibiting fibrosis in various organs. Here, Sassi et al. show that miR-29 can also enhance fibrotic signalling and pathological hypertrophy of the heart through its action in cardiomyocytes.

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          Most cited references60

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          Most mammalian mRNAs are conserved targets of microRNAs.

          MicroRNAs (miRNAs) are small endogenous RNAs that pair to sites in mRNAs to direct post-transcriptional repression. Many sites that match the miRNA seed (nucleotides 2-7), particularly those in 3' untranslated regions (3'UTRs), are preferentially conserved. Here, we overhauled our tool for finding preferential conservation of sequence motifs and applied it to the analysis of human 3'UTRs, increasing by nearly threefold the detected number of preferentially conserved miRNA target sites. The new tool more efficiently incorporates new genomes and more completely controls for background conservation by accounting for mutational biases, dinucleotide conservation rates, and the conservation rates of individual UTRs. The improved background model enabled preferential conservation of a new site type, the "offset 6mer," to be detected. In total, >45,000 miRNA target sites within human 3'UTRs are conserved above background levels, and >60% of human protein-coding genes have been under selective pressure to maintain pairing to miRNAs. Mammalian-specific miRNAs have far fewer conserved targets than do the more broadly conserved miRNAs, even when considering only more recently emerged targets. Although pairing to the 3' end of miRNAs can compensate for seed mismatches, this class of sites constitutes less than 2% of all preferentially conserved sites detected. The new tool enables statistically powerful analysis of individual miRNA target sites, with the probability of preferentially conserved targeting (P(CT)) correlating with experimental measurements of repression. Our expanded set of target predictions (including conserved 3'-compensatory sites), are available at the TargetScan website, which displays the P(CT) for each site and each predicted target.
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            Dysregulation of microRNAs after myocardial infarction reveals a role of miR-29 in cardiac fibrosis.

            Acute myocardial infarction (MI) due to coronary artery occlusion is accompanied by a pathological remodeling response that includes hypertrophic cardiac growth and fibrosis, which impair cardiac contractility. Previously, we showed that cardiac hypertrophy and heart failure are accompanied by characteristic changes in the expression of a collection of specific microRNAs (miRNAs), which act as negative regulators of gene expression. Here, we show that MI in mice and humans also results in the dysregulation of specific miRNAs, which are similar to but distinct from those involved in hypertrophy and heart failure. Among the MI-regulated miRNAs are members of the miR-29 family, which are down-regulated in the region of the heart adjacent to the infarct. The miR-29 family targets a cadre of mRNAs that encode proteins involved in fibrosis, including multiple collagens, fibrillins, and elastin. Thus, down-regulation of miR-29 would be predicted to derepress the expression of these mRNAs and enhance the fibrotic response. Indeed, down-regulation of miR-29 with anti-miRs in vitro and in vivo induces the expression of collagens, whereas over-expression of miR-29 in fibroblasts reduces collagen expression. We conclude that miR-29 acts as a regulator of cardiac fibrosis and represents a potential therapeutic target for tissue fibrosis in general.
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              Towards a molecular understanding of microRNA-mediated gene silencing.

              MicroRNAs (miRNAs) are a conserved class of small non-coding RNAs that assemble with Argonaute proteins into miRNA-induced silencing complexes (miRISCs) to direct post-transcriptional silencing of complementary mRNA targets. Silencing is accomplished through a combination of translational repression and mRNA destabilization, with the latter contributing to most of the steady-state repression in animal cell cultures. Degradation of the mRNA target is initiated by deadenylation, which is followed by decapping and 5'-to-3' exonucleolytic decay. Recent work has enhanced our understanding of the mechanisms of silencing, making it possible to describe in molecular terms a continuum of direct interactions from miRNA target recognition to mRNA deadenylation, decapping and 5'-to-3' degradation. Furthermore, an intricate interplay between translational repression and mRNA degradation is emerging.
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                Author and article information

                Contributors
                stefan.engelhardt@tum.de
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                20 November 2017
                20 November 2017
                2017
                : 8
                : 1614
                Affiliations
                [1 ]ISNI 0000000123222966, GRID grid.6936.a, Institute of Pharmacology and Toxicology, , Technical University Munich (TUM), ; 80802 Munich, Germany
                [2 ]DZHK (German Center for Cardiovascular Research), partner site Munich Heart Alliance, 80802 Munich, Germany
                [3 ]ISNI 0000 0001 0668 7884, GRID grid.5596.f, VIB Center for the Biology of Disease, VIB, ; 3000 Leuven, Belgium
                [4 ]ISNI 0000 0001 0668 7884, GRID grid.5596.f, Center for Human Genetics and Leuven Institute for Neurodegenerative Disorders (LIND), , KU Leuven and Universitaire Ziekenhuizen, ; 3000 Leuven, Belgium
                [5 ]ISNI 0000 0001 1014 0849, GRID grid.419491.0, Cardiovascular and Metabolic Sciences, , Max-Delbrüeck-Center for Molecular Medicine in the Helmholtz Association (MDC), ; 13125 Berlin, Germany
                [6 ]DZHK (German Center for Cardiovascular Research), Partner Site Berlin, 10115 Berlin, Germany
                [7 ]ISNI 0000 0001 2218 4662, GRID grid.6363.0, Charité-Universitätsmedizin, ; 10117 Berlin, Germany
                [8 ]ISNI 0000 0000 9529 9877, GRID grid.10423.34, Institute of Molecular and Translational Therapeutic Strategies (IMTTS), , Hannover Medical School, ; 30625 Hannover, Germany
                [9 ]ISNI 0000 0001 2322 6764, GRID grid.13097.3c, King’s British Heart Foundation Centre, , King’s College London, ; SE5 9NU London, UK
                [10 ]ISNI 0000 0001 0670 2351, GRID grid.59734.3c, Present Address: Mount Sinai, Cardiovascular Research Center, , Icahn School of Medicine at Mount Sinai, ; New York, NY 10029 USA
                Author information
                http://orcid.org/0000-0001-6494-9432
                http://orcid.org/0000-0002-0597-829X
                http://orcid.org/0000-0001-5378-8661
                Article
                1737
                10.1038/s41467-017-01737-4
                5696364
                29158499
                71e236b3-a98e-4001-af59-416365a40228
                © The Author(s) 2017

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 26 November 2014
                : 12 October 2017
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