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      Evolution and functional differentiation of recently diverged phytochelatin synthase genes from Arundo donax L.

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          Abstract

          Plant phytochelatin synthases undergo evolutionarily rapid functional differentiation after duplication, allowing fast and precise adjustment of metal detoxification capacity by modulation of both transcription and enzymatic activity.

          Abstract

          Phytochelatin synthases (PCSs) play pivotal roles in the detoxification of heavy metals and metalloids in plants; however, little information on the evolution of recently duplicated PCS genes in plant species is available. Here we characterize the evolution and functional differentiation of three PCS genes from the giant reed ( Arundo donax L.), a biomass/bioenergy crop with remarkable resistance to cadmium and other heavy metals. Phylogenetic reconstruction with PCS genes from fully sequenced monocotyledonous genomes indicated that the three A. donax PCSs, namely AdPCS1-3, form a monophyletic clade. The AdPCS1-3 genes were expressed at low levels in many A. donax organs and displayed different levels of cadmium-responsive expression in roots. Overexpression of AdPCS1-3 in Arabidopsis thaliana and yeast reproduced the phenotype of functional PCS genes. Mass spectrometry analyses confirmed that AdPCS1-3 are all functional enzymes, but with significant differences in the amount of the phytochelatins synthesized. Moreover, heterogeneous evolutionary rates characterized the AdPCS1-3 genes, indicative of relaxed natural selection. These results highlight the elevated functional differentiation of A. donax PCS genes from both a transcriptional and an enzymatic point of view, providing evidence of the high evolvability of PCS genes and of plant responsiveness to heavy metal stress.

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          ProtTest: selection of best-fit models of protein evolution.

          Using an appropriate model of amino acid replacement is very important for the study of protein evolution and phylogenetic inference. We have built a tool for the selection of the best-fit model of evolution, among a set of candidate models, for a given protein sequence alignment. ProtTest is available under the GNU license from http://darwin.uvigo.es
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            Nramp5 is a major transporter responsible for manganese and cadmium uptake in rice.

            Paddy rice (Oryza sativa) is able to accumulate high concentrations of Mn without showing toxicity; however, the molecular mechanisms underlying Mn uptake are unknown. Here, we report that a member of the Nramp (for the Natural Resistance-Associated Macrophage Protein) family, Nramp5, is involved in Mn uptake and subsequently the accumulation of high concentrations of Mn in rice. Nramp5 was constitutively expressed in the roots and encodes a plasma membrane-localized protein. Nramp5 was polarly localized at the distal side of both exodermis and endodermis cells. Knockout of Nramp5 resulted in a significant reduction in growth and grain yield, especially when grown at low Mn concentrations. This growth reduction could be partially rescued by supplying high concentrations of Mn but not by the addition of Fe. Mineral analysis showed that the concentration of Mn and Cd in both the roots and shoots was lower in the knockout line than in wild-type rice. A short-term uptake experiment revealed that the knockout line lost the ability to take up Mn and Cd. Taken together, Nramp5 is a major transporter of Mn and Cd and is responsible for the transport of Mn and Cd from the external solution to root cells.
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              Heavy metals toxicity in plants: An overview on the role of glutathione and phytochelatins in heavy metal stress tolerance of plants

              S.K. Yadav (2010)
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                Author and article information

                Contributors
                Role: Editor
                Journal
                J Exp Bot
                J. Exp. Bot
                exbotj
                Journal of Experimental Botany
                Oxford University Press (UK )
                0022-0957
                1460-2431
                01 October 2019
                30 May 2019
                30 May 2019
                : 70
                : 19
                : 5391-5405
                Affiliations
                [1 ] Department of Biodiversity and Molecular Ecology, Research and Innovation Centre, Fondazione Edmund Mach , San Michele all’Adige (TN) , Italy
                [2 ] Dipartimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Università degli studi di Parma, Parco Area delle Scienze , Parma, Italy
                [3 ] Dipartimento di Biologia, Università di Pisa , Pisa, Italy
                [4 ] Dipartimento di Patologia Chirurgica, Medica, Molecolare e dell’Area Critica, Università di Pisa , Pisa, Italy
                [5 ] Biology Center of the Czech Academy of Sciences , Czech Republic
                Author notes

                These authors contributed equally to this work.

                Author information
                http://orcid.org/0000-0003-2074-1546
                http://orcid.org/0000-0002-7326-7289
                http://orcid.org/0000-0003-1765-8709
                http://orcid.org/0000-0003-0611-5549
                http://orcid.org/0000-0001-5018-087X
                Article
                erz266
                10.1093/jxb/erz266
                6793451
                31145784
                759ae97c-c2d8-407f-a11b-c5b74f703edc
                © The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Experimental Biology.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

                History
                : 21 August 2018
                : 24 May 2019
                : 24 May 2019
                Page count
                Pages: 15
                Funding
                Funded by: MIUR-PRIN
                Award ID: 20158HTL58
                Categories
                Research Papers
                Plant—Environment Interactions

                Plant science & Botany
                cadmium,divergence,gene duplication,giant reed,phytochelatin synthase,phytochelatins,subfunctionalization

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