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      Transcriptomic Analysis of Leaf in Tree Peony Reveals Differentially Expressed Pigments Genes

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          Abstract

          Tree peony ( Paeonia suffruticosa Andrews) is an important traditional flower in China. Besides its beautiful flower, the leaf of tree peony has also good ornamental value owing to its leaf color change in spring. So far, the molecular mechanism of leaf color change in tree peony is unclear. In this study, the pigment level and transcriptome of three different color stages of tree peony leaf were analyzed. The purplish red leaf was rich in anthocyanin, while yellowish green leaf was rich in chlorophyll and carotenoid. Transcriptome analysis revealed that 4302 differentially expressed genes (DEGs) were upregulated, and 4225 were downregulated in the purplish red leaf vs. yellowish green leaf. Among these DEGs, eight genes were predicted to participate in anthocyanin biosynthesis, eight genes were predicted involved in porphyrin and chlorophyll metabolism, and 10 genes were predicted to participate in carotenoid metabolism. In addition, 27 MYBs, 20 bHLHs, 36 WD40 genes were also identified from DEGs. Anthocyanidin synthase ( ANS) is the key gene that controls the anthocyanin level in tree peony leaf. Protochlorophyllide oxido-reductase ( POR) is the key gene which regulated the chlorophyll content in tree peony leaf.

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          Most cited references33

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          Recent advances on the regulation of anthocyanin synthesis in reproductive organs.

          Anthocyanins represent the major red, purple, violet and blue pigments in many flowers and fruits. They attract pollinators and seed dispersers and defend plants against abiotic and biotic stresses. Anthocyanins are produced by a specific branch of the flavonoid pathway, which is differently regulated in monocot and dicot species. In the monocot maize, the anthocyanin biosynthesis genes are activated as a single unit by a ternary complex of MYB-bHLH-WD40 transcription factors (MBW complex). In the dicot Arabidopsis, anthocyanin biosynthesis genes can be divided in two subgroups: early biosynthesis genes (EBGs) are activated by co-activator independent R2R3-MYB transcription factors, whereas late biosynthesis genes (LBGs) require an MBW complex. In addition to this, a complex regulatory network of positive and negative feedback mechanisms controlling anthocyanin synthesis in Arabidopsis has been described. Recent studies have broadened our understanding of the regulation of anthocyanin synthesis in flowers and fruits, indicating that a regulatory system based on the cooperation of MYB, bHLH and WD40 proteins that control floral and fruit pigmentation is common to many dicot species. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.
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            Seeing is believing: engineering anthocyanin and carotenoid biosynthetic pathways.

            The biosynthetic pathways of flavonoids and carotenoids have been well established, and the biosynthetic genes have been mostly isolated. Metabolic engineering of their biosynthetic pathways has provided not only novel colored or health-beneficial plants but also excellent models to study the efficacy of such engineering. In order to achieve a specific color by accumulating a corresponding compound, it is necessary to upregulate the pathway leading to the compound and downregulate the competing pathway. The regulation of gene expression has to be optimized in a target crop as well.
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              Biosynthesis of betalains: yellow and violet plant pigments.

              Betalains are the yellow and violet pigments that substitute anthocyanins in plants belonging to the order Caryophyllales. These pigments have attracted much attention because of their bioactivities, which range from an antioxidant capacity to the chemoprevention of cancer. However, the biosynthetic pathway of betalains remains under discussion; the main steps have been characterized in recent years, but multiple side reactions are possible. The key enzymes involved have only recently been described, providing clues about the regulation of betalain biosynthesis. In this review, we provide a comprehensive view of the biosynthetic scheme of betalains and discuss the different reactions that have been demonstrated experimentally or proposed in the literature. Copyright © 2013 Elsevier Ltd. All rights reserved.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                Molecules
                Molecules
                molecules
                Molecules : A Journal of Synthetic Chemistry and Natural Product Chemistry
                MDPI
                1420-3049
                20 February 2017
                February 2017
                : 22
                : 2
                : 324
                Affiliations
                College of Landscape Architecture and Art, Northwest A & F University, Yangling 712100, Shaanxi, China; luojianrang@ 123456163.com (J.L.); shiqianqian2005@ 123456163.com (Q.S.)
                Author notes
                [* ]Correspondence: niulixin@ 123456nwafu.edu.cn (L.N.); zhangyanlong@ 123456nwafu.edu.cn (Y.Z.); Tel.: +86-29-8708-2878 (Y.Z.), Fax: +86-29-8708-0269 (L.N. & Y.Z.)
                Article
                molecules-22-00324
                10.3390/molecules22020324
                6155769
                28230761
                75c3877f-9f0d-482d-a13c-7d1b7f318328
                © 2017 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 15 January 2017
                : 13 February 2017
                Categories
                Article

                tree peony,transcriptome,flavonoids,chlorophyll,carotenoid,differentially expressed genes (degs)

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