Separating functionalized single-wall carbon nanotubes (SWCNTs) from functionalized amorphous carbon is challenging, due to their polydispersity and similar physicochemical properties. We describe a single-step, dialytic separation method that takes advantage of the ability of heavily functionalized SWCNTs to bundle in a polar environment while maintaining their solubility. Experiments on functionalized SWCNTs were compared with functionalized, C 60 fullerenes (buckyballs) to probe the general applicability of the method and further characterize the bundling process. This approach may simultaneously be used to purify a functionalization reaction mixture of unreacted small molecules and of residual solvents, such as dimethylformamide.