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      Why are most organelle genomes transmitted maternally?

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          Abstract

          Why the DNA-containing organelles, chloroplasts, and mitochondria, are inherited maternally is a long standing and unsolved question. However, recent years have seen a paradigm shift, in that the absoluteness of uniparental inheritance is increasingly questioned. Here, we review the field and propose a unifying model for organelle inheritance. We argue that the predominance of the maternal mode is a result of higher mutational load in the paternal gamete. Uniparental inheritance evolved from relaxed organelle inheritance patterns because it avoids the spread of selfish cytoplasmic elements. However, on evolutionary timescales, uniparentally inherited organelles are susceptible to mutational meltdown (Muller's ratchet). To prevent this, fall-back to relaxed inheritance patterns occurs, allowing low levels of sexual organelle recombination. Since sexual organelle recombination is insufficient to mitigate the effects of selfish cytoplasmic elements, various mechanisms for uniparental inheritance then evolve again independently. Organelle inheritance must therefore be seen as an evolutionary unstable trait, with a strong general bias to the uniparental, maternal, mode.

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          Most cited references133

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          Population size does not influence mitochondrial genetic diversity in animals.

          Within-species genetic diversity is thought to reflect population size, history, ecology, and ability to adapt. Using a comprehensive collection of polymorphism data sets covering approximately 3000 animal species, we show that the widely used mitochondrial DNA (mtDNA) marker does not reflect species abundance or ecology: mtDNA diversity is not higher in invertebrates than in vertebrates, in marine than in terrestrial species, or in small than in large organisms. Nuclear loci, in contrast, fit these intuitive expectations. The unexpected mitochondrial diversity distribution is explained by recurrent adaptive evolution, challenging the neutral theory of molecular evolution and questioning the relevance of mtDNA in biodiversity and conservation studies.
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            Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs.

            Comparison of plant mitochondrial (mt), chloroplast (cp) and nuclear (n) DNA sequences shows that the silent substitution rate in mtDNA is less than one-third that in cpDNA, which in turn evolves only half as fast as plant nDNA. The slower rate in mtDNA than in cpDNA is probably due to a lower mutation rate. Silent substitution rates in plant and mammalian mtDNAs differ by one or two orders of magnitude, whereas the rates in nDNAs may be similar. In cpDNA, the rate of substitution both at synonymous sites and in noncoding sequences in the inverted repeat is greatly reduced in comparison to single-copy sequences. The rate of cpDNA evolution appears to have slowed in some dicot lineages following the monocot/dicot split, and the slowdown is more conspicuous at nonsynonymous sites than at synonymous sites.
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              The inheritance of genes in mitochondria and chloroplasts: laws, mechanisms, and models.

              C Birky (2001)
              The inheritance of mitochondrial and chloroplast genes differs from that of nuclear genes in showing vegetative segregation, uniparental inheritance, intracellular selection, and reduced recombination. Vegetative segregation and some cases of uniparental inheritance are due to stochastic replication and partitioning of organelle genomes. The rate and pattern of vegetative segregation depend partly on the numbers of genomes and of organelles per cell, but more importantly on the extent to which genomes are shared between organelles, their distribution in the cell, the variance in number of replications per molecule, and the variance in numerical and genotypic partitioning of organelles and genomes. Most of these parameters are unknown for most organisms, but a simple binomial probability model using the effective number of genomes is a useful substitute. Studies using new cytological, molecular, and genetic methods are shedding some light on the processes involved in segregation, and also on the mechanisms of intracellular selection and uniparental inheritance in mammals. But significant issues remain unresolved, notably about the extent of paternal transmission and mitochondrial fusion in mammals.
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                Author and article information

                Journal
                Bioessays
                Bioessays
                bies
                Bioessays
                BlackWell Publishing Ltd (Oxford, UK )
                0265-9247
                1521-1878
                January 2015
                10 October 2014
                : 37
                : 1
                : 80-94
                Affiliations
                [1 ]Max-Planck-Institut für Molekulare Pflanzenphysiologie Potsdam-Golm, Germany
                Author notes
                Corresponding author:, Stephan Greiner, E-mail: greiner@ 123456mpimp-golm.mpg.de

                Integrated in some models is the idea that uniparental inheritance might also help with reducing the negative impact of cytoplasmic parasites 31, 32. However, with few exceptions (e.g. Wolbachia and related infectious bacteria in arthropods and nematodes), the frequent presence and vertical transmission of cytoplasmic parasites is not documented for many eukaryotes. In addition, the assumption that mixing of such parasites generally reduces host fitness is doubtable 33. Moreover, uniparental transmission may exclude organelles from vertical transmission, but not necessarily parasites at the same time. For example, paternal transmission of a virus was observed in barley 34, a species that inherits its organelles maternally (Table 1).

                Article
                10.1002/bies.201400110
                4305268
                25302405
                78bde49c-70db-4ef1-9228-be7a89ad32f1
                © 2015 The Authors. Bioessays published by WILEY Periodicals, Inc.

                This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

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                Prospects & Overviews

                Cell biology
                cytoplasmic incompatibility,muller's ratchet,organelle inheritance,organelle recombination,paternal leakage,plastome-genome incompatibility,selfish cytoplasmic elements

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