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      The long noncoding RNA THRIL knockdown protects hypoxia-induced injuries of H9C2 cells through regulating miR-99a

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          Abstract

          Background

          Myocardial infarction (MI) is a leading cause of disease with high morbidity and mortality worldwide. Recent studies have revealed that long non-coding RNAs (lncRNAs) are involved in heart disease pathogenesis. This study aimed to investigate the effect and the molecular basis of THRIL on hypoxia-injured H9C2 cells.

          Methods

          THRIL, miR-99a and Brahma-related gene 1 (Brg1) expressions in H9C2 cells were altered by transient transfections. The cells were subjected to hypoxia for 4 h, and then the levels of THRIL, miR-99a and Brg1 were investigated. Cell viability, migration and invasion, and apoptotic cells were respectively measured by trypan blue exclusion assay, transwell migration assay and flow cytometry assay. Dual luciferase reporter assay was conducted to verify the interaction between miR-99a and THRIL. Furthermore, levels of apoptosis-, PI3K/AKT and mTOR pathways-related factors were measured by western blotting.

          Results

          Hypoxia induced an increase of THRIL but a reduction of miR-99a and Brg1. THRIL inhibition significantly attenuated hypoxia-induced cell injuries, as increased cell viability, migration and invasion, and decreased cell apoptosis. THRIL negatively regulated miR-99a expression through sponging with miR-99a binding site, and miR-99a inhibition abolished the protective effects of THRIL knockdown against hypoxia-induced injury in H9C2 cells. Furthermore, miR-99a positively regulated the expression of Brg1. Brg1 inhibition promoted hypoxia-induced cell injuries, while Brg1 overexpression alleviated hypoxia-induced cell injuries. Moreover, Brg1 overexpression activated PI3K/AKT and mTOR pathways.

          Conclusions

          This study demonstrated that THRIL inhibition represented a protective effect against hypoxia-induced injuries in H9C2 cells by up-regulating miR-99a expression.

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          Most cited references35

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          A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?

          Here, we present a unifying hypothesis about how messenger RNAs, transcribed pseudogenes, and long noncoding RNAs "talk" to each other using microRNA response elements (MREs) as letters of a new language. We propose that this "competing endogenous RNA" (ceRNA) activity forms a large-scale regulatory network across the transcriptome, greatly expanding the functional genetic information in the human genome and playing important roles in pathological conditions, such as cancer. Copyright © 2011 Elsevier Inc. All rights reserved.
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            An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.

            NEAT1 RNA, a highly abundant 4 kb ncRNA, is retained in nuclei in approximately 10 to 20 large foci that we show are completely coincident with paraspeckles, nuclear domains implicated in mRNA nuclear retention. Depletion of NEAT1 RNA via RNAi eradicates paraspeckles, suggesting that it controls sequestration of the paraspeckle proteins PSP1 and p54, factors linked to A-I editing. Unlike overexpression of PSP1, NEAT1 overexpression increases paraspeckle number, and paraspeckles emanate exclusively from the NEAT1 transcription site. The PSP-1 RNA binding domain is required for its colocalization with NEAT1 RNA in paraspeckles, and biochemical analyses support that NEAT1 RNA binds with paraspeckle proteins. Unlike other nuclear-retained RNAs, NEAT1 RNA is not A-I edited, consistent with a structural role in paraspeckles. Collectively, results demonstrate that NEAT1 functions as an essential structural determinant of paraspeckles, providing a precedent for a ncRNA as the foundation of a nuclear domain.
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              lncRNAs transactivate Staufen1-mediated mRNA decay by duplexing with 3'UTRs via Alu elements

              Staufen1 (STAU1)-mediated mRNA decay (SMD) degrades translationally active mRNAs that bind the double-stranded (ds)RNA binding protein STAU1 within their 3'-untranslated regions (3'UTRs)1,2. Earlier studies defined the STAU1 binding site (SBS) within ADP ribosylation factor 1 (ARF1) mRNA as a 19-base-pair stem with a 100-nucleotide apex2. However, we were unable to identify comparable structures within the 3'UTRs of other SMD targets. Here we report that SBSs can be formed by imperfect base-pairing between an Alu element within the 3'UTR of an SMD target and another Alu element within a cytoplasmic and polyadenylated long noncoding RNA (lncRNA). Individual lncRNAs can downregulate a subset of SMD targets, and distinct lncRNAs can downregulate the same SMD target. These are previously unappreciated functions for ncRNAs and Alu elements3–5. Not all mRNAs that contain a 3'UTR Alu element are targeted for SMD despite the presence of a complementary lncRNA that targets other mRNAs for SMD. Most known trans-acting RNA effectors consist of fewer than 200 nucleotides and include snoRNAs and microRNAs. Our finding that STAU1 binding to mRNAs can be transactivated by lncRNAs uncovers an unexpected strategy used by cells to recruit proteins to mRNAs and mediate their decay. We name these lncRNAs “half(½)-sbsRNAs”.
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                Author and article information

                Journal
                Cardiol J
                Cardiol J
                Cardiology Journal
                Via Medica
                1897-5593
                1898-018X
                2019
                06 November 2019
                : 26
                : 5
                : 564-574
                Affiliations
                [1 ]Department of Cardiovasology, Shanghai Songjiang District Center Hospital, Shanghai, China
                [2 ]Department of Cardiology, Seventh People’s Hospital of Shanghai University of Traditional Chinese Medicine, Shanghai, China
                Author notes
                Address for correspondence: Dr. Yansong Li, Department of Cardiovasology, Shanghai Songjiang Distict Center Hospital, No. 746 Zhongshan Middle Road, Songjiang District, Shanghai 201600, China, e-mail: liyansong1522@ 123456126.com
                Article
                cardj-26-5-564
                10.5603/CJ.a2018.0054
                8084388
                29745968
                80ea5413-6233-4b1a-afb9-a652957adc46
                Copyright © 2019 Via Medica

                This article is available in open access under Creative Common Attribution-Non-Commercial-No Derivatives 4.0 International (CC BY-NC-ND 4.0) license, allowing to download articles and share them with others as long as they credit the authors and the publisher, but without permission to change them in any way or use them commercially.

                History
                : 27 September 2017
                : 15 January 2018
                Categories
                Basic Science and Experimental Cardiology
                Original Article

                thril,mir-99a,brg1,myocardial infarction,hypoxia
                thril, mir-99a, brg1, myocardial infarction, hypoxia

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