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      Epigenetic marks as the link between environment and development: examination of the associations between attachment, socioeconomic status, and methylation of the SLC6A4 gene

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          Abstract

          Background

          Epigenetic processes act as a link between environment and individual development. This pilot study examined the association between socioeconomic status (SES), attachment, and methylation of the promoter region of the serotonin transporter gene ( SLC6A4).

          Methods

          Attachment classification and SLC6A4 methylation was determined in 100 late adolescents. We hypothesized that (1) SES would interact with methylation to predict higher unresolved loss (UL) or trauma scores on the Adult Attachment Interview; (2) across SES, participants with unresolved attachment would have lower levels of methylation than organized or secure participants; and (3) within the unresolved classification, SES would predict methylation.

          Results

          Results showed that lower methylation and low‐SES were associated with higher UL, and higher methylation and low‐SES were associated with higher unresolved trauma. Across SES, unresolved participants had lower levels of  methylation than organized participants. Within the unresolved category, low‐SES unresolved participants had higher levels of methylation than mid/upper‐SES participants. SES was unrelated to methylation within the secure and organized categories.

          Conclusions

          These results suggest that the quality of attachment relationships may impact epigenetic processes.

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          Most cited references49

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          Analysing and interpreting DNA methylation data.

          DNA methylation is an epigenetic mark that has suspected regulatory roles in a broad range of biological processes and diseases. The technology is now available for studying DNA methylation genome-wide, at a high resolution and in a large number of samples. This Review discusses relevant concepts, computational methods and software tools for analysing and interpreting DNA methylation data. It focuses not only on the bioinformatic challenges of large epigenome-mapping projects and epigenome-wide association studies but also highlights software tools that make genome-wide DNA methylation mapping more accessible for laboratories with limited bioinformatics experience.
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            A comprehensive methylome map of lineage commitment from hematopoietic progenitors

            Epigenetic modifications must underlie lineage-specific differentiation as terminally differentiated cells express tissue-specific genes, but their DNA sequence is unchanged. Hematopoiesis provides a well-defined model to study epigenetic modifications during cell-fate decisions, as multipotent progenitors (MPPs) differentiate into progressively restricted myeloid or lymphoid progenitors. While DNA methylation is critical for myeloid versus lymphoid differentiation, as demonstrated by the myeloerythroid bias in Dnmt1 hypomorphs1, a comprehensive DNA methylation map of hematopoietic progenitors, or of any multipotent/oligopotent lineage, does not exist. Here we examined 4.6 million CpG sites throughout the genome for MPPs, common lymphoid progenitors (CLPs), common myeloid progenitors (CMPs), granulocyte/macrophage progenitors (GMPs), and thymocyte progenitors (DN1, DN2, DN3). Dramatic epigenetic plasticity accompanied both lymphoid and myeloid restriction. Myeloid commitment involved less global DNA methylation than lymphoid commitment, supported functionally by myeloid skewing of progenitors following treatment with a DNA methyltransferase inhibitor. Differential DNA methylation correlated with gene expression more strongly at CpG island shores than CpG islands. Many examples of genes and pathways not previously known to be involved in choice between lymphoid/myeloid differentiation have been identified, such as Arl4c and Jdp2. Several transcription factors, including Meis1, were methylated and silenced during differentiation, suggesting a role in maintaining an undifferentiated state. Additionally, epigenetic modification of modifiers of the epigenome appears to be important in hematopoietic differentiation. Our results directly demonstrate that modulation of DNA methylation occurs during lineage-specific differentiation and defines a comprehensive map of the methylation and transcriptional changes that accompany myeloid versus lymphoid fate decisions.
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              Social neuroscience and health: neurophysiological mechanisms linking social ties with physical health.

              Although considerable research has shown the importance of social connection for physical health, little is known about the higher-level neurocognitive processes that link experiences of social connection or disconnection with health-relevant physiological responses. Here we review the key physiological systems implicated in the link between social ties and health and the neural mechanisms that may translate social experiences into downstream health-relevant physiological responses. Specifically, we suggest that threats to social connection may tap into the same neural and physiological 'alarm system' that responds to other critical survival threats, such as the threat or experience of physical harm. Similarly, experiences of social connection may tap into basic reward-related mechanisms that have inhibitory relationships with threat-related responding. Indeed, the neurocognitive correlates of social disconnection and connection may be important mediators for understanding the relationships between social ties and health.
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                Author and article information

                Journal
                Brain Behav
                Brain Behav
                10.1002/(ISSN)2157-9032
                BRB3
                Brain and Behavior
                John Wiley and Sons Inc. (Hoboken )
                2162-3279
                09 June 2016
                July 2016
                : 6
                : 7 ( doiID: 10.1002/brb3.2016.6.issue-7 )
                : e00480
                Affiliations
                [ 1 ] Department of Social WelfareUniversity of California, Berkeley Berkeley California
                [ 2 ] Department of StatisticsUniversity of California, San Francisco San Francisco California
                [ 3 ] Department of Psychiatry and PediatricsUniversity of California, San Francisco San Francisco California
                [ 4 ] Department of PsychiatryUniversity of California, San Francisco San Francisco California
                [ 5 ] Department of PsychiatryKaiser‐Permanente San Francisco Medical Center San Francisco California
                [ 6 ] Center for Health & CommunityUniversity of California San Francisco California
                Author notes
                [*] [* ] Correspondence

                Karen Jones‐Mason, University of California, San Francisco, P.O. Box 472091, San Francisco, CA 94147. Tel: 415‐476‐7655; Fax: 415‐713‐0522; E‐mail: Karen.Jones-Mason@ 123456ucsf.edu

                Article
                BRB3480
                10.1002/brb3.480
                4951620
                27458544
                81aadfe6-3f9b-4753-923c-4c8da6cb3f86
                © 2016 The Authors. Brain and Behavior published by Wiley Periodicals, Inc.

                This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 14 September 2015
                : 25 February 2016
                : 16 March 2016
                Page count
                Pages: 18
                Categories
                Original Research
                Original Research
                Custom metadata
                2.0
                brb3480
                July 2016
                Converter:WILEY_ML3GV2_TO_NLMPMC version:4.9.2 mode:remove_FC converted:20.07.2016

                Neurosciences
                attachment,socioeconomic status,methylation,slc6a4 and 5‐httlpr
                Neurosciences
                attachment, socioeconomic status, methylation, slc6a4 and 5‐httlpr

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