109
views
0
recommends
+1 Recommend
1 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Approximate Bayesian Computation of radiocarbon and paleoenvironmental record shows population resilience on Rapa Nui (Easter Island)

      research-article

      Read this article at

      ScienceOpenPublisherPMC
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Examining how past human populations responded to environmental and climatic changes is a central focus of the historical sciences. The use of summed probability distributions (SPD) of radiocarbon dates as a proxy for estimating relative population sizes provides a widely applicable method in this research area. Paleodemographic reconstructions and modeling with SPDs, however, are stymied by a lack of accepted methods for model fitting, tools for assessing the demographic impact of environmental or climatic variables, and a means for formal multi-model comparison. These deficiencies severely limit our ability to reliably resolve crucial questions of past human-environment interactions. We propose a solution using Approximate Bayesian Computation (ABC) to fit complex demographic models to observed SPDs. Using a case study from Rapa Nui (Easter Island), a location that has long been the focus of debate regarding the impact of environmental and climatic changes on its human population, we find that past populations were resilient to environmental and climatic challenges. Our findings support a growing body of evidence showing stable and sustainable communities on the island. The ABC framework offers a novel approach for exploring regions and time periods where questions of climate-induced demographic and cultural change remain unresolved.

          Abstract

          Summed probability distributions of radiocarbon dates can be used to estimate past demography, but methods to test for associations with environmental change are lacking. Here, DiNapoli et al. propose an approach using Approximate Bayesian Computation and illustrate it in a case study of Rapa Nui.

          Related collections

          Most cited references101

          • Record: found
          • Abstract: found
          • Article: not found

          Inferring human population size and separation history from multiple genome sequences

          The availability of complete human genome sequences from populations across the world has given rise to new population genetic inference methods that explicitly model their ancestral relationship under recombination and mutation. So far, application of these methods to evolutionary history more recent than 20-30 thousand years ago and to population separations has been limited. Here we present a new method that overcomes these shortcomings. The Multiple Sequentially Markovian Coalescent (MSMC) analyses the observed pattern of mutations in multiple individuals, focusing on the first coalescence between any two individuals. Results from applying MSMC to genome sequences from nine populations across the world suggest that the genetic separation of non-African ancestors from African Yoruban ancestors started long before 50,000 years ago, and give information about human population history as recently as 2,000 years ago, including the bottleneck in the peopling of the Americas, and separations within Africa, East Asia and Europe.
            • Record: found
            • Abstract: found
            • Article: not found

            Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems.

            Approximate Bayesian computation (ABC) methods can be used to evaluate posterior distributions without having to calculate likelihoods. In this paper, we discuss and apply an ABC method based on sequential Monte Carlo (SMC) to estimate parameters of dynamical models. We show that ABC SMC provides information about the inferability of parameters and model sensitivity to changes in parameters, and tends to perform better than other ABC approaches. The algorithm is applied to several well-known biological systems, for which parameters and their credible intervals are inferred. Moreover, we develop ABC SMC as a tool for model selection; given a range of different mathematical descriptions, ABC SMC is able to choose the best model using the standard Bayesian model selection apparatus.
              • Record: found
              • Abstract: found
              • Article: not found
              Is Open Access

              SHCal20 SOUTHERN HEMISPHERE CALIBRATION, 0–55,000 YEARS CAL BP

              Early researchers of radiocarbon levels in Southern Hemisphere tree rings identified a variable North-South hemispheric offset, necessitating construction of a separate radiocarbon calibration curve for the South. We present here SHCal20, a revised calibration curve from 0–55,000 cal BP, based upon SHCal13 and fortified by the addition of 14 new tree-ring data sets in the 2140–0, 3520–3453, 3608–3590 and 13,140–11,375 cal BP time intervals. We detail the statistical approaches used for curve construction and present recommendations for the use of the Northern Hemisphere curve (IntCal20), the Southern Hemisphere curve (SHCal20) and suggest where application of an equal mixture of the curves might be more appropriate. Using our Bayesian spline with errors-in-variables methodology, and based upon a comparison of Southern Hemisphere tree-ring data compared with contemporaneous Northern Hemisphere data, we estimate the mean Southern Hemisphere offset to be 36 ± 27 14 C yrs older.

                Author and article information

                Contributors
                dinapoli@binghamton.edu
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                24 June 2021
                24 June 2021
                2021
                : 12
                : 3939
                Affiliations
                [1 ]GRID grid.264260.4, ISNI 0000 0001 2164 4508, Environmental Studies Program, Department of Anthropology, Harpur College of Arts and Sciences, , Binghamton University, State University of New York, ; Binghamton, NY USA
                [2 ]GRID grid.5335.0, ISNI 0000000121885934, Department of Archaeology, , University of Cambridge, ; Cambridge, UK
                [3 ]GRID grid.487901.3, International Archaeological Research Institute Inc., ; Honolulu, HI USA
                [4 ]GRID grid.134563.6, ISNI 0000 0001 2168 186X, The Honors College and School of Anthropology, , University of Arizona, ; Tucson, AZ USA
                Author information
                http://orcid.org/0000-0003-2180-2195
                http://orcid.org/0000-0001-6727-5138
                http://orcid.org/0000-0003-4391-3590
                Article
                24252
                10.1038/s41467-021-24252-z
                8225912
                34168160
                81cad53d-cd8c-4758-b5c6-a1b6c4d9a8f5
                © The Author(s) 2021

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 12 March 2021
                : 2 June 2021
                Categories
                Article
                Custom metadata
                © The Author(s) 2021

                Uncategorized
                palaeoecology,environmental social sciences,archaeology
                Uncategorized
                palaeoecology, environmental social sciences, archaeology

                Comments

                Comment on this article

                Related Documents Log