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      Presentation and outcome of suspected sepsis in a high-HIV burden, high antiretroviral coverage setting

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          Abstract

          Objective:

          To define sepsis syndromes in high-HIV burden settings in the antiretroviral therapy (ART) era. Methods: We characterized a prospective cohort of adults presenting to a tertiary emergency department in Harare, Zimbabwe with suspected community-acquired sepsis using blood and urine cultures, urine tuberculosis lipoarabinomannan (TB LAM), and serum cryptococcal antigen (CrAg) testing. The primary outcome was 30-day all-cause mortality.

          Results:

          Of 142 patients enrolled 68% ( n = 96/142, 95% confidence interval (CI) [60–75%]) were HIV-positive, 41% ( n = 39/96, 95% CI [31–50%]) of whom were ART-naïve. Among HIV-positive patients, both opportunistic pathogens (TB LAM-positivity, 36%, 95% CI [24–48%]; CrAg-positivity, 15%, 95% CI [7–23%]) and severe non-AIDS infections ( S. pneumoniae urine antigen-positivity 12%, 95% CI [4–20%]; bacteraemia 17% ( n = 16/96, 95% CI [9–24%]), of which 56% ( n = 9/16, 95% CI [30–80%]) were gram-negative organisms) were common. Klebsiella pneumoniae recovered from blood and urine was uniformly resistant to ceftriaxone, as were most Escherichia coli isolates. Acknowledging the power limitations of our study, we conclude that relative to HIV-negative patients, HIV-positive patients had modestly higher 30-day mortality (adjusted hazard ratio (HR) 1.88, 95% CI [0.78–4.55]; p = 0.16, and 3.59, 95% CI [1.27–10.16], p = 0.02) among those with and without viral suppression, respectively.

          Conclusion:

          Rapid point-of-care assays provide substantial clinically actionable information in the setting of suspected sepsis, even in areas with high ART coverage. Antimicrobial resistance to first-line antibiotics in high burden settings is a growing threat.

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          Most cited references50

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          The Third International Consensus Definitions for Sepsis and Septic Shock (Sepsis-3).

          Definitions of sepsis and septic shock were last revised in 2001. Considerable advances have since been made into the pathobiology (changes in organ function, morphology, cell biology, biochemistry, immunology, and circulation), management, and epidemiology of sepsis, suggesting the need for reexamination.
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            The SOFA (Sepsis-related Organ Failure Assessment) score to describe organ dysfunction/failure. On behalf of the Working Group on Sepsis-Related Problems of the European Society of Intensive Care Medicine.

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              Assessment of Global Incidence and Mortality of Hospital-treated Sepsis. Current Estimates and Limitations.

              Reducing the global burden of sepsis, a recognized global health challenge, requires comprehensive data on the incidence and mortality on a global scale.
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                Author and article information

                Journal
                9610933
                20844
                Int J Infect Dis
                Int J Infect Dis
                International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases
                1201-9712
                1878-3511
                4 August 2020
                11 April 2020
                July 2020
                12 April 2021
                : 96
                : 276-283
                Affiliations
                [a ]University of Zimbabwe College of Health Sciences, Department of Medical Microbiology, Box A178 Avondale, Harare, Zimbabwe
                [b ]Zuckerberg San Francisco General Hospital, Division of Pulmonary and Critical Care Medicine, University of California, San Francisco, USA
                [c ]Parirenyatwa Group of Hospitals, Public Health Microbiology Laboratory, Mazowe Street, Harare, Zimbabwe
                [d ]Stanford University Department of Medicine/Infectious Diseases, Stanford, CA 94305-5107, USA
                Author notes
                [1]

                These authors are contributed equally to this work.

                Authors’ information

                Please note that CB and WC contributed equally to this manuscript and should be identified as co-first authors.

                [* ]Corresponding author at: University of California, San Francisco, Division of Pulmonary and Critical Care Medicine, Zuckerberg San Francisco General Hospital, 1001 Potrero Avenue, Rm 5K1, San Francisco, CA 94110-0111, USA. john.metcalfe@ 123456ucsf.edu (J. Metcalfe).
                Article
                NIHMS1612039
                10.1016/j.ijid.2020.04.004
                8040698
                32289564
                81d78ed2-dfcf-40c6-85b5-189964813cfe

                This is an open access article under the CC BY-NC-ND license ( http://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                Categories
                Article

                Infectious disease & Microbiology
                hiv-associated sepsis,sepsis in low-income countries,antimicrobial resistance

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