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      Applications of functional data analysis: A systematic review

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          Abstract

          Background

          Functional data analysis (FDA) is increasingly being used to better analyze, model and predict time series data. Key aspects of FDA include the choice of smoothing technique, data reduction, adjustment for clustering, functional linear modeling and forecasting methods.

          Methods

          A systematic review using 11 electronic databases was conducted to identify FDA application studies published in the peer-review literature during 1995–2010. Papers reporting methodological considerations only were excluded, as were non-English articles.

          Results

          In total, 84 FDA application articles were identified; 75.0% of the reviewed articles have been published since 2005. Application of FDA has appeared in a large number of publications across various fields of sciences; the majority is related to biomedicine applications (21.4%). Overall, 72 studies (85.7%) provided information about the type of smoothing techniques used, with B-spline smoothing (29.8%) being the most popular. Functional principal component analysis (FPCA) for extracting information from functional data was reported in 51 (60.7%) studies. One-quarter (25.0%) of the published studies used functional linear models to describe relationships between explanatory and outcome variables and only 8.3% used FDA for forecasting time series data.

          Conclusions

          Despite its clear benefits for analyzing time series data, full appreciation of the key features and value of FDA have been limited to date, though the applications show its relevance to many public health and biomedical problems. Wider application of FDA to all studies involving correlated measurements should allow better modeling of, and predictions from, such data in the future especially as FDA makes no a priori age and time effects assumptions.

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          Most cited references102

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          Modelling and smoothing parameter estimation with multiple quadratic penalties

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              The relationship between neurocognitive function and noncontact anterior cruciate ligament injuries.

              Biomechanical analyses suggest that the loss of neuromuscular control is associated with noncontact anterior cruciate ligament sprains; however, previous research has not explored the link between neurocognitive function and unintentional knee injuries. To determine if athletes who suffer a noncontact anterior cruciate ligament injury demonstrate decreased baseline neurocognitive performance when compared with matched controls. Case control study; Level of evidence, 3. The baseline scores from a computerized neurocognitive test battery (ImPACT) were analyzed to compare verbal memory, visual memory, processing speed, and reaction time. Eighty intercollegiate athletes who, subsequent to testing, experienced noncontact anterior cruciate ligament injuries, were matched with 80 controls based on height, weight, age, gender, sport, position, and years of experience at the collegiate level. Statistical differences were found between the noncontact anterior cruciate ligament injury group and the matched controls on all 4 neurocognitive subtests. Noncontact anterior cruciate ligament-injured athletes demonstrated significantly slower reaction time (F(1,158) = 9.66, P = .002) and processing speed (F(1,158) = 12.04, P = .001) and performed worse on visual (F(1,158) = 19.16, P = .000) and verbal memory (F(1,158) = 4.08, P = .045) composite scores when compared with controls. Neurocognitive differences may be associated with the loss of neuromuscular control and coordination errors, predisposing certain intercollegiate athletes to noncontact anterior cruciate ligament injuries.
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                Author and article information

                Journal
                BMC Med Res Methodol
                BMC Med Res Methodol
                BMC Medical Research Methodology
                BioMed Central
                1471-2288
                2013
                19 March 2013
                : 13
                : 43
                Affiliations
                [1 ]Flinders Centre for Epidemiology and Biostatistics, School of Medicine, Faculty of Health Sciences, Flinders University, Adelaide, SA, 5001, Australia
                [2 ]Centre for Healthy and Safe Sports (CHASS), University of Ballarat, SMB Campus, Ballarat, VIC, 3353, Australia
                Article
                1471-2288-13-43
                10.1186/1471-2288-13-43
                3626842
                23510439
                825fe0a8-28e0-49a1-af25-56ee4ea4843a
                Copyright ©2013 Ullah and Finch; licensee BioMed Central Ltd.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 28 June 2012
                : 4 March 2013
                Categories
                Research Article

                Medicine
                functional data analysis,smoothing,functional principal component analysis,clustering,functional linear model,forecasting,time series data

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