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      A Practical Review of Proteasome Pharmacology

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          Abstract

          The ubiquitin proteasome system (UPS) degrades individual proteins in a highly regulated fashion and is responsible for the degradation of misfolded, damaged, or unneeded cellular proteins. During the past 20 years, investigators have established a critical role for the UPS in essentially every cellular process, including cell cycle progression, transcriptional regulation, genome integrity, apoptosis, immune responses, and neuronal plasticity. At the center of the UPS is the proteasome, a large and complex molecular machine containing a multicatalytic protease complex. When the efficiency of this proteostasis system is perturbed, misfolded and damaged protein aggregates can accumulate to toxic levels and cause neuronal dysfunction, which may underlie many neurodegenerative diseases. In addition, many cancers rely on robust proteasome activity for degrading tumor suppressors and cell cycle checkpoint inhibitors necessary for rapid cell division. Thus, proteasome inhibitors have proven clinically useful to treat some types of cancer, especially multiple myeloma. Numerous cellular processes rely on finely tuned proteasome function, making it a crucial target for future therapeutic intervention in many diseases, including neurodegenerative diseases, cystic fibrosis, atherosclerosis, autoimmune diseases, diabetes, and cancer. In this review, we discuss the structure and function of the proteasome, the mechanisms of action of different proteasome inhibitors, various techniques to evaluate proteasome function in vitro and in vivo, proteasome inhibitors in preclinical and clinical development, and the feasibility for pharmacological activation of the proteasome to potentially treat neurodegenerative disease.

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          Most cited references225

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          Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis.

          Soluble oligomers are common to most amyloids and may represent the primary toxic species of amyloids, like the Abeta peptide in Alzheimer's disease (AD). Here we show that all of the soluble oligomers tested display a common conformation-dependent structure that is unique to soluble oligomers regardless of sequence. The in vitro toxicity of soluble oligomers is inhibited by oligomer-specific antibody. Soluble oligomers have a unique distribution in human AD brain that is distinct from fibrillar amyloid. These results indicate that different types of soluble amyloid oligomers have a common structure and suggest they share a common mechanism of toxicity.
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            Structure of 20S proteasome from yeast at 2.4 A resolution.

            The crystal structure of the 20S proteasome from the yeast Saccharomyces cerevisiae shows that its 28 protein subunits are arranged as an (alpha1...alpha7, beta1...beta7)2 complex in four stacked rings and occupy unique locations. The interior of the particle, which harbours the active sites, is only accessible by some very narrow side entrances. The beta-type subunits are synthesized as proproteins before being proteolytically processed for assembly into the particle. The proforms of three of the seven different beta-type subunits, beta1/PRE3, beta2/PUP1 and beta5/PRE2, are cleaved between the threonine at position 1 and the last glycine of the pro-sequence, with release of the active-site residue Thr 1. These three beta-type subunits have inhibitor-binding sites, indicating that PRE2 has a chymotrypsin-like and a trypsin-like activity and that PRE3 has peptidylglutamyl peptide hydrolytic specificity. Other beta-type subunits are processed to an intermediate form, indicating that an additional nonspecific endopeptidase activity may exist which is important for peptide hydrolysis and for the generation of ligands for class I molecules of the major histocompatibility complex.
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              Functions of lysosomes.

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                Author and article information

                Contributors
                Role: ASSOCIATE EDITOR
                Journal
                Pharmacol Rev
                Pharmacol. Rev
                pharmrev
                Pharmacol Rev
                PharmRev
                Pharmacological Reviews
                The American Society for Pharmacology and Experimental Therapeutics (Bethesda, MD )
                0031-6997
                1521-0081
                April 2019
                April 2019
                April 2019
                : 71
                : 2
                : 170-197
                Affiliations
                [1]Department of Biochemistry, West Virginia University School of Medicine, Morgantown, West Virginia
                Author notes
                Address correspondence to: Dr. David M. Smith, Department of Biochemistry, West Virginia University School of Medicine, Blanchette Rockefeller Neurosciences Institute, WVU Cancer Institute, 64 Medical Center Dr., Morgantown, WV 26506. E-mail: dmsmith@ 123456hsc.wvu.edu .
                Article
                PHARMREV_015370
                10.1124/pr.117.015370
                6423620
                30867233
                83c46eb1-39fc-4fd7-a89d-1c016a12b848
                Copyright © 2019 The Author(s).

                This is an open access article distributed under the CC BY Attribution 4.0 International license.

                History
                Page count
                Figures: 4, Tables: 4, Equations: 0, References: 269, Pages: 28
                Categories
                Review Articles
                Custom metadata
                v1

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