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      Derivation and validation of a prediction rule for mortality of patients with respiratory virus-related pneumonia (RV-p score)

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          Abstract

          Background:

          Respiratory viruses are important etiologies of community-acquired pneumonia. However, current knowledge on the prognosis of respiratory virus-related pneumonia (RV-p) is limited. Thus, here we aimed to establish a clinical predictive model for mortality of patients with RV-p.

          Methods:

          A total of 1431 laboratory-confirmed patients with RV-p, including 1169 and 262 patients from respective derivation and validation cohorts from five teaching hospitals in China were assessed between January 2010 and December 2019. A prediction rule was established on the basis of risk factors for 30-day mortality of patients with RV-p from the derivation cohort using a multivariate logistic regression model.

          Results:

          The 30-day mortality of patients with RV-p was 16.8% (241/1431). The RV-p score was composed of nine predictors (including respective points of mortality risk): (a) age ⩾65 years (1 point); (b) chronic obstructive pulmonary disease (1 point); (c) mental confusion (1 point); (d) blood urea nitrogen (1 point); (e) cardiovascular disease (2 points); (f) smoking history (2 points); (g) arterial pressure of oxygen/fraction of inspiration oxygen (P aO 2/FiO 2) < 250 mmHg (2 points); (h) lymphocyte counts <0.8 × 10 9/L (2 points); (i) arterial PH < 7.35 (3 points). A total of six points was used as the cut-off value for mortality risk stratification. Our model showed a sensitivity of 0.831 and a specificity of 0.783. The area under the receiver operating characteristic curve was more prominent for RV-p scoring [0.867, 95% confidence interval (CI)0.846–0.886] when compared with both pneumonia severity index risk (0.595, 95% CI 0.566–0.624, p < 0.001) and CURB-65 scoring (0.739, 95% CI 0.713–0.765, p < 0.001).

          Conclusion:

          RV-p scoring was able to provide a good predictive accuracy for 30-day mortality, which accounted for a more effective stratification of patients with RV-p into relevant risk categories and, consequently, help physicians to make more rational clinical decisions.

          The reviews of this paper are available via the supplemental material section.

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          Most cited references40

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          BTS guidelines for the management of community acquired pneumonia in adults: update 2009.

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            Sex difference and smoking predisposition in patients with COVID-19

            Hua Cai (2020)
            The outbreak of novel coronavirus disease 2019 (COVID-19) is quickly turning into a pandemic. Although the disease is now better contained in China, 32 702 cases remain as of March 2, 2020. 10 566 cases and 166 deaths outside of China had been reported as of March 3 (WHO situation report 43), which is a large increase from the 2918 cases and 44 deaths reported on Feb 26 (WHO situation report 37). Rapid progress has been made with diagnostic reagents (eg, nucleic acid and IgM or IgG detection, or both), drug repurposing (eg, remdesivir and chloroquine), and vaccine production. Studies on the biology of viral infection and clinical management of the disease have also been published, some of which have demonstrated that differences in COVID-19 disease prevalence and severity are associated with sex, and smoking is related to higher expression of ACE2 (the receptor for severe acute respiratory syndrome coronavirus 2 [SARS-CoV-2]), so that might also be a factor. One study (preprint), 1 using single-cell sequencing, found that expression of ACE2 was more predominant in Asian men, which might be the reason for the higher prevalence of COVID-19 in this subgroup of patients than in women and patients of other ethnicities. One study of 140 patients with COVID-19 in China, 2 found the sex distribution equal; whereas, in a study of critically ill patients, 3 more men were affected (67%) than women. In a latest report 4 of 1099 patients with COVID-19 from 552 hospitals in 30 provinces in China, 58% of the patients were men. Taken together, these data seem to indicate that there might be a sex predisposition to COVID-19, with men more prone to being affected. This sex predisposition might be associated with the much higher smoking rate in men than in women in China (288 million men vs 12·6 million women were smokers in 2018). Of note, one study (preprint) 5 found that although ACE2 expression was not significantly different between Asian and white people, men and women, or subgroups aged older and younger than 60 years, it was significantly higher in current smokers of Asian ethnicity than Asian non-smokers; although no difference was found between smokers and non-smokers who were white. Nonetheless, the current literature does not support smoking as a predisposing factor in men or any subgroup for infection with SARS-CoV-2. In the study by Zhang and colleagues, 2 only 1·4% of patients were current smokers, although this number was much higher at 12·6% in the study by Guan and colleagues. 4 The relatively small proportion of current smokers in each of these two studies compared with the proportion of male smokers in China (50·5%) are unlikely to be associated with incidence or severity of COVID-19. A trend towards an association was seen between smoking and severity of COVID-19 in the study by Zhang and colleagues 2 (11·8% of smokers had non-severe disease vs 16·9% of smokers with severe disease), but it was not significant. Without strong evidence of an association between smoking and prevalence or severity of COVID-19 in Asian men compared with other subgroups, no firm conclusions can be drawn. With more cases being examined from different ethnic and genetic backgrounds worldwide, ACE2 expression variation can be better analysed and compared to establish whether it contributes to susceptibility to COVID-19 across the different subgroups. © 2020 Kateryna Kon/Science Photo Library 2020 Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
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              Viral pneumonia

              Summary About 200 million cases of viral community-acquired pneumonia occur every year—100 million in children and 100 million in adults. Molecular diagnostic tests have greatly increased our understanding of the role of viruses in pneumonia, and findings indicate that the incidence of viral pneumonia has been underestimated. In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries. Dual viral infections are common, and a third of children have evidence of viral-bacterial co-infection. In adults, viruses are the putative causative agents in a third of cases of community-acquired pneumonia, in particular influenza viruses, rhinoviruses, and coronaviruses. Bacteria continue to have a predominant role in adults with pneumonia. Presence of viral epidemics in the community, patient's age, speed of onset of illness, symptoms, biomarkers, radiographic changes, and response to treatment can help differentiate viral from bacterial pneumonia. However, no clinical algorithm exists that will distinguish clearly the cause of pneumonia. No clear consensus has been reached about whether patients with obvious viral community-acquired pneumonia need to be treated with antibiotics. Apart from neuraminidase inhibitors for pneumonia caused by influenza viruses, there is no clear role for use of specific antivirals to treat viral community-acquired pneumonia. Influenza vaccines are the only available specific preventive measures. Further studies are needed to better understand the cause and pathogenesis of community-acquired pneumonia. Furthermore, regional differences in cause of pneumonia should be investigated, in particular to obtain more data from developing countries.
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                Author and article information

                Contributors
                Role: ConceptualizationRole: Formal analysisRole: Funding acquisitionRole: InvestigationRole: MethodologyRole: SoftwareRole: SupervisionRole: Writing original draft
                Role: Data curationRole: InvestigationRole: Writing review editing
                Role: InvestigationRole: Writing review editing
                Role: InvestigationRole: Writing review editing
                Role: InvestigationRole: Writing review editing
                Journal
                Ther Adv Respir Dis
                Ther Adv Respir Dis
                TAR
                sptar
                Therapeutic Advances in Respiratory Disease
                SAGE Publications (Sage UK: London, England )
                1753-4658
                1753-4666
                11 September 2020
                Jan-Dec 2020
                : 14
                : 1753466620953780
                Affiliations
                [1-1753466620953780]Department of Infectious Diseases, Beijing Jishuitan Hospital, NO.68, Huinan North Road, Changping District, Beijing City, 100096, China
                [2-1753466620953780]Department of Pulmonary and Critical Care Medicine, Qingdao Municipal Hospital, Qingdao City, Shandong Province, China
                [3-1753466620953780]Department of Infectious Diseases and Clinical Microbiology, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China
                [4-1753466620953780]Department of Pulmonary and Critical Care Medicine, Beijing Huimin Hospital, Beijing, China
                [5-1753466620953780]Department of Pulmonary and Critical Care Medicine, the 2nd People’s Hospital of Yunnan Province, Kunming City, Yunnan Province, China
                Author notes
                Author information
                https://orcid.org/0000-0002-3147-5688
                Article
                10.1177_1753466620953780
                10.1177/1753466620953780
                7488896
                32912054
                853f7218-f533-42c6-807e-71ee4e677a47
                © The Author(s), 2020

                This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License ( https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages ( https://us.sagepub.com/en-us/nam/open-access-at-sage).

                History
                : 27 May 2020
                : 3 August 2020
                Categories
                Original Research
                Custom metadata
                January-December 2020
                ts1

                mortality,pneumonia,prediction rule,respiratory virus
                mortality, pneumonia, prediction rule, respiratory virus

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