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      Incorporating microbiota data into epidemiologic models: examples from vaginal microbiota research.

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          Abstract

          Next generation sequencing and quantitative polymerase chain reaction technologies are now widely available, and research incorporating these methods is growing exponentially. In the vaginal microbiota (VMB) field, most research to date has been descriptive. The purpose of this article is to provide an overview of different ways in which next generation sequencing and quantitative polymerase chain reaction data can be used to answer clinical epidemiologic research questions using examples from VMB research.

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          Author and article information

          Journal
          Ann Epidemiol
          Annals of epidemiology
          Elsevier BV
          1873-2585
          1047-2797
          May 2016
          : 26
          : 5
          Affiliations
          [1 ] Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK. Electronic address: j.vandewijgert@liverpool.ac.uk.
          [2 ] HIV and Sexual Health Unit, Department of Public Health, Institute of Tropical Medicine, Antwerpen, Belgium.
          Article
          S1047-2797(16)30074-6
          10.1016/j.annepidem.2016.03.004
          27130291
          85718796-d1b2-41d1-8540-aae6c30e7191
          History

          Biostatistics,Epidemiology,Microbiome,Microbiota,Next generation sequencing,Quantitative PCR,Vagina

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