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      JXB at SEB Florence 2018

      editorial

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          Abstract

          SEB Annual Meetings cover a diverse range of plant, animal and cell biology, and that diversity extends within each section – as scientists we are all specialists, but we all deeply value the wider connections between disciplines that are a vital part of the organization. That range and ethos is echoed in the plant science published in Journal of Experimental Botany (JXB) every month, and this year we have put together a virtual issue of the journal both to celebrate our approach and increase awareness of how the content is developing. The articles selected follow the plant sessions at the SEB meeting and also include those from the preceding satellite meeting, ‘Advances in Plant Reproduction – from Gametes to Seeds’. A number of papers in the issue cover fascinating aspects of pollination and reproductive investment, including the effects of temperature on pollination in faba bean (Vicia faba), which produces a move from selfing to outcrossing in this significant crop (Bishop et al., 2017; Stoddard, 2017), and the mechanism by which wheat flowers open when self-pollination fails, facilitating cross-pollination (Dixon et al., 2017; Okada et al., 2017). These findings are important in understanding fundamental mechanisms and moreover are directly relevant for breeders, and in both cases their wider importance is highlighted and further explored in the accompanying Insight articles by other research scientists. Insights in the eXtra Botany section, a part of our journal since 2016 (Raines, 2016), provide readers with accessible information beyond their specialism and highlight links between disciplines – as with the diverse sessions at the SEB meetings. Continuing the theme of plant reproduction, Staedler et al. (2017) used a new approach with computed tomography-based tools to examine reproductive investment in orchids. The high-resolution 3D imaging of flowers with almost no specimen destruction was used to count the pollen grains and ovules at two different scales in ‘deceptive’ and ‘rewarding’ species. This is interesting not just in the specific situation, understanding the balance between species types and their effects on pollinators, but also in the much wider value of the methodology in counting high-contrast objects within tissues, an aspect covered further by Legland et al. (2017). Related reviews in the issue cover the complex biomechanics of seed germination (Steinbrecher and Leubner-Metzger, 2017) and parthenocarpy, i.e. fruit set without fertilization (Joldersma and Liu, 2018; see also the Flowering Newsletter and Blog at floweringhighlights.org). Moving to broad topics in the SEB meeting, these include the genome/genomics and environmental impacts on epigenetic memory (see Rodriguez-Granados et al., 2016; Shen et al., 2016; Nakamura and Hennig, 2017; Wang and Köhler, 2017; Yolcu et al., 2018); the shaping of root architecture (Amtmann and Shahzad, 2017; Walch-Liu et al., 2017; Du and Scheres, 2018); morphogenesis in non-flowering plants (Peguero-Pina et al., 2017; Veromann-Jürgenson et al., 2017; Thelander et al., 2018); the impact of climate change on forests (Dusenge and Way, 2017; Slot and Way, 2017); general plant temperature responses (Hu et al., 2017); enhancing photosynthesis with CO2-concentrating mechanisms (Beardall and Raven, 2017; Ji et al., 2017; Rae et al., 2017); and, finally, plant biotechnology for human health and nutrition (Moses and Goossens, 2017; Poon et al., 2018). The link with societal issues has always been important in JXB, and the work by Poon et al. on cyclotides is yet another example of this close connection. It was demonstrated that introduction of a specific asparaginyl endopeptidase gene greatly improves the production of cyclic peptides in a range of plants, including Nicotiana benthamiana, as well as crops such as bush bean (Phaseolus vulgaris), lettuce and canola. As noted by the authors, cyclotides hold great potential, both as key active molecules themselves and, through their exceptional stability, as facilitators. Interpreting the science Interweaving with regular issues of the journal, our special issues provide a focus on topical areas, and these are led by authoritative Special Issue Editorials, often written by guest editors who have also been involved in organizing the scientific programmes for related conferences. These provide essential context about the overall area of research and act as a useful point of reference for each collection. But increasingly we have encouraged writers to go further than this, taking a view on the state of the field, wider implications and new directions, much as one would take away from participation in the sessions at meetings. In this issue, again linking with major sessions at the SEB meeting, such editorials cover seed development, maturation and germination (Penfield, 2017), the plant hormones auxin (Weijers et al., 2018) and jasmonate (Zhu and Napier, 2017), and plant senescence (Woo et al., 2018). All plant biology links with global environmental issues, but research in JXB often makes this connection directly, including in the editorials by Griffiths et al. (2017), which advances new evolutionary ideas in the area of carbon concentrating mechanisms in aquatic photosynthesis, and Considine et al. (2017), which sets out the need for crop improvement programmes to re-focus on legumes in coming years, addressing the challenge of food security and climate change (Considine et al., 2017). Prestigious Darwin reviews in JXB have provided readers with in-depth accounts of diverse subjects for many years, and those selected for this issue provide coverage ranging from the origins of multicellularity (Niklas et al., 2018) to trace metal metabolism (Andresen et al., 2018), seed germination (Steinbrecher and Leubner-Metzger, 2017) to control of leaf angle (Mantilla-Perez and Fernandez, 2017) and leaf hydraulic decline during dehydration (Scoffoni and Sack, 2017). Sweeping through these is the link between an understanding of basic plant function and effective breeding programmes for a rising population, and the review by Xu et al. (2017) on the enhancement of genetic gain, i.e. the increase in performance that can be achieved each year, provides an outstanding, detailed analysis. Experimental approaches Stutz et al. (2017) used a 13C-labelling technique to examine the complexity of xylem-originating CO2 and its effect on measured leaf respiration in trees. The dilemma, so important in understanding carbon allocation and cycling, is further highlighted and explained by Gessler (2017). Such rigorous experimental analysis – with significant implications for our understanding – is another characteristic of the JXB approach. The Viewpoint by Dietz (2017) similarly tackles previous experimental limitations, with the focus here on ensuring that subcellular localization is properly considered in investigating the metabolome. Such thought-provoking, short articles in the eXtra Botany section of the journal are welcome and also provide the opportunity to tackle controversial areas (e.g. Blum, 2016; Maron et al., 2016; Shabala, 2017). Community support We are proud of the link between the SEB and JXB (it is fully owned by the society), and the cross-disciplinary approach to science exemplified by the SEB Annual Meeting and the journal is clear from the themes and articles explored here. The journal is also pleased to be able to provide direct sponsorship for the satellite meeting ‘Advances in Plant Reproduction – from Gametes to Seeds’ and the session covering morphogenesis in non-flowering plants. High-impact science and excellent quality metrics, underpinned by an outstanding editorial board, will always be critical for JXB. But as a community-led journal other aspects including free open access publication for corresponding authors of subscribing institutions, any reasonable format for initial submission, free data archiving with Dryad Digital Repository (up to 20 GB) and full integration with the BioRxiv preprint server are also given a very high priority. This year publication on acceptance has been a popular new addition ensuring that papers are available at the earliest possible opportunity. We also undertake the highest standards of quality assessment, with friendly and supportive staff making the publication process as efficient as possible. As always, comments are very welcome – just email the editorial office at j.exp.bot@lancaster.ac.uk with any feedback and/or questions.

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          Most cited references41

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          Jasmonate regulates leaf senescence and tolerance to cold stress: crosstalk with other phytohormones.

          Diqiu Yu (2017)
          Plants are challenged with numerous abiotic stresses, such as drought, cold, heat, and salt stress. These environmental stresses are major causes of crop failure and reduced yields worldwide. Phytohormones play essential roles in regulating various plant physiological processes and alleviating stressful perturbations. Jasmonate (JA), a group of oxylipin compounds ubiquitous in the plant kingdom, acts as a crucial signal to modulate multiple plant processes. Recent studies have shown evidence supporting the involvement of JA in leaf senescence and tolerance to cold stress. Concentrations of JA are much higher in senescent leaves compared with those in non-senescent ones. Treatment with exogenous JA induces leaf senescence and expression of senescence-associated genes. In response to cold stress, exogenous application of JA enhances Arabidopsis freezing tolerance with or without cold acclimation. Consistently, biosynthesis of endogenous JA is activated in response to cold exposure. JA positively regulates the CBF (C-REPEAT BINDING FACTOR) transcriptional pathway to up-regulate downstream cold-responsive genes and ultimately improve cold tolerance. JA interacts with other hormone signaling pathways (such as auxin, ethylene, and gibberellin) to regulate leaf senescence and tolerance to cold stress. In this review, we summarize recent studies that have provided insights into JA-mediated leaf senescence and cold-stress tolerance.
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            Lateral root formation and the multiple roles of auxin

            Root systems can display variable architectures that contribute to survival strategies of plants. The model plant Arabidopsis thaliana possesses a tap root system, in which the primary root and lateral roots (LRs) are major architectural determinants. The phytohormone auxin fulfils multiple roles throughout LR development. In this review, we summarize recent advances in our understanding of four aspects of LR formation: (i) LR positioning, which determines the spatial distribution of lateral root primordia (LRP) and LRs along primary roots; (ii) LR initiation, encompassing the activation of nuclear migration in specified lateral root founder cells (LRFCs) up to the first asymmetric cell division; (iii) LR outgrowth, the 'primordium-intrinsic' patterning of de novo organ tissues and a meristem; and (iv) LR emergence, an interaction between LRP and overlaying tissues to allow passage through cell layers. We discuss how auxin signaling, embedded in a changing developmental context, plays important roles in all four phases. In addition, we discuss how rapid progress in gene network identification and analysis, modeling, and four-dimensional imaging techniques have led to an increasingly detailed understanding of the dynamic regulatory networks that control LR development.
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              Trace metal metabolism in plants.

              Many trace metals are essential micronutrients, but also potent toxins. Due to natural and anthropogenic causes, vastly different trace metal concentrations occur in various habitats, ranging from deficient to toxic levels. Therefore, one focus of plant research is on the response to trace metals in terms of uptake, transport, sequestration, speciation, physiological use, deficiency, toxicity, and detoxification. In this review, we cover most of these aspects for the essential micronutrients copper, iron, manganese, molybdenum, nickel, and zinc to provide a broader overview than found in other recent reviews, to cross-link aspects of knowledge in this very active research field that are often seen in a separated way. For example, individual processes of metal usage, deficiency, or toxicity often were not mechanistically interconnected. Therefore, this review also aims to stimulate the communication of researchers following different approaches, such as gene expression analysis, biochemistry, or biophysics of metalloproteins. Furthermore, we highlight recent insights, emphasizing data obtained under physiologically and environmentally relevant conditions.
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                Author and article information

                Journal
                J Exp Bot
                J. Exp. Bot
                exbotj
                Journal of Experimental Botany
                Oxford University Press (UK )
                0022-0957
                1460-2431
                20 July 2018
                13 June 2018
                13 June 2018
                : 69
                : 16
                : 3797-3799
                Affiliations
                [1 ]Department of Biological Sciences, University of Essex, Colchester, UK
                [2 ]Bailrigg House, Lancaster University, Lancaster, UK
                Author notes

                Editor in Chief, Journal of Experimental Botany

                Senior Commissioning Editor/ Science Writer, Journal of Experimental Botany

                Article
                ery218
                10.1093/jxb/ery218
                6054182
                29905802
                8c665819-88d5-41f1-97d1-c968ed29034e
                © The Author(s) 2018. Published by Oxford University Press on behalf of the Society for Experimental Biology.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                Page count
                Pages: 3
                Categories
                eXtra Botany
                Virtual Issue Editorial

                Plant science & Botany
                climate change,co2-concentrating mechanisms,epigenetics,morphogenesis,plant biotechnology,plant reproduction,plant temperature responses,root architecture

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