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      Reducing the Number of Individuals to Monitor Shoaling Fish Systems – Application of the Shannon Entropy to Construct a Biological Warning System Model

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          Abstract

          The present study aims at identifying the lowest number of fish (European seabass) that could be used for monitoring and/or experimental purposes in small-scale fish facilities by quantifying the effect that the number of individuals has on the Shannon entropy (SE) of the trajectory followed by the shoal’s centroid. Two different experiments were performed: (i) one starting with 50 fish and decreasing to 25, 13, and 1 fish, and (ii) a second experiment starting with one fish, adding one new fish per day during 5 days, ending up with five fish in the tank. The fish were recorded for 1h daily, during which time a stochastic event (a hit in the tank) was introduced. The SE values were calculated from the images corresponding to three arbitrary basal (shoaling) periods of 3.5 min prior to the event, and to the 3.5 min period immediately after the event (schooling response). Taking both experiments together, the coefficient of variation (CV) of the SE among measurements was largest for one fish systems (CV 37.12 and 17.94% for the daily average basal and response SE, respectively) and decreased concomitantly with the number of fish (CV 8.6–10% for the basal SE of 2 to 5 fish systems and 5.86, 2.69, and 2.31% for the basal SE of 13, 25, and 50 fish, respectively). The SE of the systems kept a power relationship with the number of fish (basal: R 2= 0.93 and response: R 2= 0.92). Thus, 5–13 individuals should be the lowest number for a compromise between acceptable variability (<10%) in the data and reduction in the number of fish. We believe this to be the first scientific work made to estimate the minimum number of individuals to be used in subsequent experimental (including behavioral) studies using shoaling fish species that reaches a compromise between the reduction in number demanded by animal welfare guidelines and a low variability in the fish system’s response.

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          Most cited references41

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          Prediction and Entropy of Printed English

          C. Shannon (1951)
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            Interaction Ruling Animal Collective Behaviour Depends on Topological rather than Metric Distance: Evidence from a Field Study

            Numerical models indicate that collective animal behaviour may emerge from simple local rules of interaction among the individuals. However, very little is known about the nature of such interaction, so that models and theories mostly rely on aprioristic assumptions. By reconstructing the three-dimensional position of individual birds in airborne flocks of few thousands members, we prove that the interaction does not depend on the metric distance, as most current models and theories assume, but rather on the topological distance. In fact, we discover that each bird interacts on average with a fixed number of neighbours (six-seven), rather than with all neighbours within a fixed metric distance. We argue that a topological interaction is indispensable to maintain flock's cohesion against the large density changes caused by external perturbations, typically predation. We support this hypothesis by numerical simulations, showing that a topological interaction grants significantly higher cohesion of the aggregation compared to a standard metric one.
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              Aquaculture: global status and trends

              Aquaculture contributed 43 per cent of aquatic animal food for human consumption in 2007 (e.g. fish, crustaceans and molluscs, but excluding mammals, reptiles and aquatic plants) and is expected to grow further to meet the future demand. It is very diverse and, contrary to many perceptions, dominated by shellfish and herbivorous and omnivorous pond fish either entirely or partly utilizing natural productivity. The rapid growth in the production of carnivorous species such as salmon, shrimp and catfish has been driven by globalizing trade and favourable economics of larger scale intensive farming. Most aquaculture systems rely on low/uncosted environmental goods and services, so a critical issue for the future is whether these are brought into company accounts and the consequent effects this would have on production economics. Failing that, increased competition for natural resources will force governments to allocate strategically or leave the market to determine their use depending on activities that can extract the highest value. Further uncertainties include the impact of climate change, future fisheries supplies (for competition and feed supply), practical limits in terms of scale and in the economics of integration and the development and acceptability of new bio-engineering technologies. In the medium term, increased output is likely to require expansion in new environments, further intensification and efficiency gains for more sustainable and cost-effective production. The trend towards enhanced intensive systems with key monocultures remains strong and, at least for the foreseeable future, will be a significant contributor to future supplies. Dependence on external feeds (including fish), water and energy are key issues. Some new species will enter production and policies that support the reduction of resource footprints and improve integration could lead to new developments as well as reversing decline in some more traditional systems.
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                Author and article information

                Contributors
                Journal
                Front Physiol
                Front Physiol
                Front. Physiol.
                Frontiers in Physiology
                Frontiers Media S.A.
                1664-042X
                08 May 2018
                2018
                : 9
                : 493
                Affiliations
                [1] 1Department of Graphic Design & Engineering Projects, Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU , Bilbao, Spain
                [2] 2Research Centre for Experimental Marine Biology and Biotechnology – Plentziako Itsas Estazioa, University of the Basque Country UPV/EHU , Plentzia, Spain
                [3] 3Department of Systems Engineering and Automatic Control, Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU , Bilbao, Spain
                [4] 4Centre for Autonomous Marine Operations and Systems, Department of Marine Technology, Norwegian University of Science and Technology , Trondheim, Norway
                [5] 5IKERBASQUE Basque Foundation for Science , Bilbao, Spain
                [6] 6Norwegian College of Fishery Science, Faculty of Biosciences, Fisheries and Economics, University of Tromsø , Tromsø, Norway
                Author notes

                Edited by: Sladjana Z. Spasić, University of Belgrade, Serbia

                Reviewed by: Gonzalo Marcelo Ramírez-Avila, Universidad Mayor de San Andrés, Bolivia; Hector Zenil, Karolinska Institute (KI), Sweden

                *Correspondence: Harkaitz Eguiraun, harkaitz.eguiraun@ 123456ehu.eus

                This article was submitted to Fractal Physiology, a section of the journal Frontiers in Physiology

                Article
                10.3389/fphys.2018.00493
                5952214
                8ce2c185-81a1-4145-96e4-ac57f6e3e4f9
                Copyright © 2018 Eguiraun, Casquero, Sørensen and Martinez.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 28 February 2018
                : 18 April 2018
                Page count
                Figures: 8, Tables: 6, Equations: 1, References: 50, Pages: 13, Words: 0
                Categories
                Physiology
                Original Research

                Anatomy & Physiology
                fish monitoring,biological warning systems,fish welfare,the 3rs,shannon entropy,non-linear signal processing,non-invasive monitoring,intelligent aquaculture

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