62
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Model Organisms Facilitate Rare Disease Diagnosis and Therapeutic Research

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Efforts to identify the genetic underpinnings of rare undiagnosed diseases increasingly involve the use of next-generation sequencing and comparative genomic hybridization methods. These efforts are limited by a lack of knowledge regarding gene function, and an inability to predict the impact of genetic variation on the encoded protein function. Diagnostic challenges posed by undiagnosed diseases have solutions in model organism research, which provides a wealth of detailed biological information. Model organism geneticists are by necessity experts in particular genes, gene families, specific organs, and biological functions. Here, we review the current state of research into undiagnosed diseases, highlighting large efforts in North America and internationally, including the Undiagnosed Diseases Network (UDN) (Supplemental Material, File S1) and UDN International (UDNI), the Centers for Mendelian Genomics (CMG), and the Canadian Rare Diseases Models and Mechanisms Network (RDMM). We discuss how merging human genetics with model organism research guides experimental studies to solve these medical mysteries, gain new insights into disease pathogenesis, and uncover new therapeutic strategies.

          Related collections

          Most cited references104

          • Record: found
          • Abstract: found
          • Article: not found
          Is Open Access

          The zebrafish reference genome sequence and its relationship to the human genome.

          Zebrafish have become a popular organism for the study of vertebrate gene function. The virtually transparent embryos of this species, and the ability to accelerate genetic studies by gene knockdown or overexpression, have led to the widespread use of zebrafish in the detailed investigation of vertebrate gene function and increasingly, the study of human genetic disease. However, for effective modelling of human genetic disease it is important to understand the extent to which zebrafish genes and gene structures are related to orthologous human genes. To examine this, we generated a high-quality sequence assembly of the zebrafish genome, made up of an overlapping set of completely sequenced large-insert clones that were ordered and oriented using a high-resolution high-density meiotic map. Detailed automatic and manual annotation provides evidence of more than 26,000 protein-coding genes, the largest gene set of any vertebrate so far sequenced. Comparison to the human reference genome shows that approximately 70% of human genes have at least one obvious zebrafish orthologue. In addition, the high quality of this genome assembly provides a clearer understanding of key genomic features such as a unique repeat content, a scarcity of pseudogenes, an enrichment of zebrafish-specific genes on chromosome 4 and chromosomal regions that influence sex determination.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            The molecular biology of memory storage: a dialogue between genes and synapses.

            E R Kandel (2001)
            One of the most remarkable aspects of an animal's behavior is the ability to modify that behavior by learning, an ability that reaches its highest form in human beings. For me, learning and memory have proven to be endlessly fascinating mental processes because they address one of the fundamental features of human activity: our ability to acquire new ideas from experience and to retain these ideas over time in memory. Moreover, unlike other mental processes such as thought, language, and consciousness, learning seemed from the outset to be readily accessible to cellular and molecular analysis. I, therefore, have been curious to know: What changes in the brain when we learn? And, once something is learned, how is that information retained in the brain? I have tried to address these questions through a reductionist approach that would allow me to investigate elementary forms of learning and memory at a cellular molecular level-as specific molecular activities within identified nerve cells.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              A gene complex controlling segmentation in Drosophila.

              E B Lewis (1978)
              The bithorax gene complex in Drosophila contains a minimum of eight genes that seem to code for substances controlling levels of thoracic and abdominal development. The state of repression of at least four of these genes is controlled by cis-regulatory elements and a separate locus (Polycomb) seems to code for a repressor of the complex. The wild-type and mutant segmentation patterns are consistent with an antero-posterior gradient in repressor concentration along the embryo and a proximo-distal gradient along the chromosome in the affinities for repressor of each gene's cis-regulatory element.
                Bookmark

                Author and article information

                Journal
                Genetics
                Genetics
                genetics
                genetics
                genetics
                Genetics
                Genetics Society of America
                0016-6731
                1943-2631
                September 2017
                31 August 2017
                31 August 2017
                : 207
                : 1
                : 9-27
                Affiliations
                [* ]Department of Molecular and Human Genetics, Baylor College of Medicine (BCM), Houston, Texas 77030
                []Department of Pediatrics, Baylor College of Medicine (BCM), Houston, Texas 77030
                []Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital, Houston, Texas 77030
                [§ ]Program in Developmental Biology, Baylor College of Medicine (BCM), Houston, Texas 77030
                [** ]Department of Neuroscience, Baylor College of Medicine (BCM), Houston, Texas 77030
                [†† ]Department of Pediatrics, Section of Child Neurology, Baylor College of Medicine (BCM), Houston, Texas 77030
                [‡‡ ]Institute of Neuroscience, University of Oregon, Eugene, Oregon 97403
                [§§ ]Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia V6T 1Z4C, Canada
                [*** ]Children’s Hospital of Eastern Ontario Research Institute, University of Ottawa, Ontario K1H 8L1, Canada
                [††† ]Department of Pediatrics, University of Montreal, Quebec H3T 1C5, Canada
                [‡‡‡ ]Howard Hughes Medical Institute, Baylor College of Medicine (BCM), Houston, Texas 77030
                Author notes
                [1]

                These authors contributed equally to this work.

                [3 ]Corresponding author: Baylor College of Medicine, 1250 Moursund St., Suite 1125, Houston, TX 77030. E-mail: hbellen@ 123456bcm.edu
                Author information
                http://orcid.org/0000-0001-5245-5910
                http://orcid.org/0000-0003-2172-8036
                http://orcid.org/0000-0003-4814-6765
                http://orcid.org/0000-0002-5476-2137
                http://orcid.org/0000-0003-4186-8052
                http://orcid.org/0000-0001-9713-7107
                http://orcid.org/0000-0001-5992-5989
                Article
                203067
                10.1534/genetics.117.203067
                5586389
                28874452
                8df88435-88f9-4017-abc7-e91e3cf0c3e6
                Copyright © 2017 by the Genetics Society of America

                Available freely online through the author-supported open access option.

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 14 April 2017
                : 06 July 2017
                Page count
                Figures: 4, Tables: 3, Equations: 0, References: 155, Pages: 19
                Categories
                Review

                Genetics
                functional genomics,drosophila,zebrafish,human,genetic diseases,whole-exome sequencing,diagnostics

                Comments

                Comment on this article