The l,d-transpeptidases (Ldts) are promising antibiotic targets for treating tuberculosis. We report screening of cysteine-reactive inhibitors against Ldt Mt2 from Mycobacterium tuberculosis. Structural studies on Ldt Mt2 with potent inhibitor ebselen reveal opening of the benzisoselenazolone ring by a nucleophilic cysteine, forming a complex involving extensive hydrophobic interactions with a substrate-binding loop.
†Electronic supplementary information (ESI) available: Experimental details, IC 50 curves, mass spectra, electron density maps. See DOI: 10.1039/c9cc04145a