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      Circulating microRNA signature for the diagnosis of very high-risk prostate cancer

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          Significance

          Serum microRNAs (miRNAs) have emerged as potential noninvasive biomarkers to diagnose prostate cancer (PCa), the most common noncutaneous malignancy among Western men. However, intermediate grades of PCa cannot be distinguished from aggressive forms using current miRNA signatures due to the heterogeneity of PCas. Recently, a high-throughput, spherical nucleic acid-based miRNA expression profiling platform, called the Scano-miR bioassay, was developed to measure the expression levels of miRNAs with both high sensitivity and specificity. By studying serum miRNAs of PCa using the Scano-miR bioassay, we identified a unique molecular signature specific for very high-risk aggressive PCa. This molecular signature will assist in differentiating patients who may benefit from therapy from those who can be closely monitored on active surveillance.

          Abstract

          We report the identification of a molecular signature using the Scano-miR profiling platform based on the differential expression of circulating microRNAs (miRNA, miR) in serum samples specific to patients with very high-risk (VHR) prostate cancer (PCa). Five miRNA PCa biomarkers (miR-200c, miR-605, miR-135a*, miR-433, and miR-106a) were identified as useful for differentiating indolent and aggressive forms of PCa. All patients with VHR PCa in the study had elevated serum levels of miR-200c. Circulating miR-433, which was differentially expressed in patients with VHR versus low-risk (LR) forms of PCa, was not detectable by quantitative real-time PCR in samples from healthy volunteers. In blind studies, the five miRNA PCa biomarkers were able to differentiate patients with VHR PCas from those with LR forms as well as healthy individuals with at least 89% accuracy. Biological pathway analysis showed the predictive capability of these miRNA biomarkers for the diagnosis and prognosis of VHR aggressive PCa.

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          Author and article information

          Journal
          Proc Natl Acad Sci U S A
          Proc. Natl. Acad. Sci. U.S.A
          pnas
          pnas
          PNAS
          Proceedings of the National Academy of Sciences of the United States of America
          National Academy of Sciences
          0027-8424
          1091-6490
          20 September 2016
          6 September 2016
          : 113
          : 38
          : 10655-10660
          Affiliations
          [1] aInterdepartmental Biological Sciences Program, Northwestern University , Evanston, IL 60208;
          [2] bInternational Institute for Nanotechnology, Northwestern University , Evanston, IL 60208;
          [3] cDepartment of Biomedical Engineering, Northwestern University , Evanston, IL 60208;
          [4] dHealth and Biomedical Informatics Division, Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University , Chicago, IL 60611;
          [5] eDepartment of Urology, Feinberg School of Medicine, Northwestern University , Chicago, IL 60611;
          [6] fRobert H. Lurie Comprehensive Cancer Center, Northwestern University , Chicago, IL 60611;
          [7] gInstitute for BioNanotechnology and Medicine, Northwestern University , Chicago, IL 60611;
          [8] hDepartment of Chemistry, Northwestern University , Evanston, IL 60208
          Author notes

          Contributed by Chad A. Mirkin, July 18, 2016 (sent for review May 7, 2016; reviewed by Shuming Nie and Norm Smith)

          Author contributions: A.H.A., A.W.S., J.J.M., C.S.T., and C.A.M. designed research; A.H.A., A.W.S., J.J.W., and G.F. performed research; A.H.A., A.W.S., and G.F. contributed new reagents/analytic tools; A.H.A., A.W.S., J.J.W., G.F., and C.S.T. analyzed data; and A.H.A., A.W.S., J.J.W., G.F., J.J.M., C.S.T., and C.A.M. wrote the paper.

          Reviewers: S.N., Emory University and Georgia Institute of Technology; and N.S., University of Chicago.

          1A.H.A. and A.W.S. contributed equally to this work.

          Article
          PMC5035901 PMC5035901 5035901 201611596
          10.1073/pnas.1611596113
          5035901
          27601638
          90c29070-4288-4431-84c0-37aae77a9cc5
          History
          Page count
          Pages: 6
          Funding
          Funded by: HHS | National Institutes of Health (NIH) 100000002
          Award ID: U54 CA151880
          Funded by: HHS | National Institutes of Health (NIH) 100000002
          Award ID: U54 CA199091
          Funded by: HHS | NIH | National Cancer Institute (NCI) 100000054
          Award ID: P50 CA180995
          Funded by: HHS | NIH | National Cancer Institute (NCI) 100000054
          Award ID: NCI CA060553
          Funded by: HHS | NIH | National Center for Advancing Translational Sciences (NCATS) 100006108
          Award ID: 8UL1TR000150
          Funded by: National Science Foundation (NSF) 100000001
          Award ID: DGE-1007911
          Funded by: HHS | National Institutes of Health (NIH) 100000002
          Award ID: T32 GM008449
          Categories
          Biological Sciences
          Medical Sciences

          Scano-miR,prostate cancer,microRNA,spherical nucleic acid,biomarker

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