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      Novel long non‐coding RNA LINC02323 promotes epithelial‐mesenchymal transition and metastasis via sponging miR‐1343‐3p in lung adenocarcinoma

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          Abstract

          Background

          We have previously developed a unique metastasis‐associated signature consisting of six long non‐coding RNAs (lncRNAs), including a novel lncRNA, namely LINC02323. In the present study, we aimed to investigate the underlying roles of LINC02323 in the migration, invasion and TGF‐β‐induced epithelial‐mesenchymal transition (EMT) of lung adenocarcinoma (LUAD) cells.

          Methods

          The distribution of LINC02323 was detected by the nuclear‐plasma separation experiment. Cell proliferation was assessd by MTT assay, and cell migration and invation were detected by transwell assays. EMT was detected by RT‐qPCR and western blotting. Interaction between miRNA and LINC02323 was predicted by starBase v2.0 and confirmed by the double luciferase reporting system.

          Results

          LINC02323 was distributed in the cytoplasm and nucleus. The overexpression or deletion of LINC02323 did not affect the proliferation of LUAD cells, while significantly affected the migration and invasion of LUAD cells. TGF‐β‐induced EMT process was significantly affected by both RNA interference (RNAi) and overexpression of LINC02323. The predicted results showed that there were binding sites between LINC02323 and miR‐1343‐3p. The expression of LINC02323 was found to be negatively correlated with miR‐1343‐3p in LUAD by analyzing The Cancer Genome Atlas (TCGA) database. The double luciferase reporting system, RT‐qPCR and western blotting experiments confirmed that LINC02323 could bind to miR‐1343‐3p, which bound to TGF‐β receptor 1 (TGFBR1). Inhibition of miR‐1343‐3p reversed LINC02323 silencing‐mediated suppression of migration, invasion and EMT.

          Conclusions

          LINC02323 acts as a competing endogenous RNA (ceRNA), which sponged miR‐1343‐3p to upregulate the TGFBR1 expression and promote the EMT and metastasis in LUAD.

          Key points
          Significant findings of the study

          LINC02323 promotes epithelial‐mesenchymal transition and metastasis via sponging miR‐1343‐3p in lung adenocarcinoma.

          What this study adds

          LINC02323 is a key molecule in the process of invasion and metastasis of LUAD and might be used as a potential target in metastatic cancer.

          Abstract

          LINC02323 acts as a competing endogenous RNA (ceRNA), which sponged miR‐1343‐3p to upregulate the TGFBR1 expression and promote the EMT and metastasis in LUAD.

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          Most cited references21

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          starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

          Although microRNAs (miRNAs), other non-coding RNAs (ncRNAs) (e.g. lncRNAs, pseudogenes and circRNAs) and competing endogenous RNAs (ceRNAs) have been implicated in cell-fate determination and in various human diseases, surprisingly little is known about the regulatory interaction networks among the multiple classes of RNAs. In this study, we developed starBase v2.0 (http://starbase.sysu.edu.cn/) to systematically identify the RNA–RNA and protein–RNA interaction networks from 108 CLIP-Seq (PAR-CLIP, HITS-CLIP, iCLIP, CLASH) data sets generated by 37 independent studies. By analyzing millions of RNA-binding protein binding sites, we identified ∼9000 miRNA-circRNA, 16 000 miRNA-pseudogene and 285 000 protein–RNA regulatory relationships. Moreover, starBase v2.0 has been updated to provide the most comprehensive CLIP-Seq experimentally supported miRNA-mRNA and miRNA-lncRNA interaction networks to date. We identified ∼10 000 ceRNA pairs from CLIP-supported miRNA target sites. By combining 13 functional genomic annotations, we developed miRFunction and ceRNAFunction web servers to predict the function of miRNAs and other ncRNAs from the miRNA-mediated regulatory networks. Finally, we developed interactive web implementations to provide visualization, analysis and downloading of the aforementioned large-scale data sets. This study will greatly expand our understanding of ncRNA functions and their coordinated regulatory networks.
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            Non-Smad Signaling Pathways of the TGF-β Family.

            Ying Zhang (2017)
            Transforming growth factor β (TGF-β) and structurally related factors use several intracellular signaling pathways in addition to Smad signaling to regulate a wide array of cellular functions. These non-Smad signaling pathways are activated directly by ligand-occupied receptors to reinforce, attenuate, or otherwise modulate downstream cellular responses. This review summarizes the current knowledge of the mechanisms by which non-Smad signaling pathways are directly activated in response to ligand binding, how activation of these pathways impinges on Smads and non-Smad targets, and how final cellular responses are affected in response to these noncanonical signaling modes.
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              Signaling pathway cooperation in TGF-β-induced epithelial-mesenchymal transition.

              Transdifferentiation of epithelial cells into cells with mesenchymal properties and appearance, that is, epithelial-mesenchymal transition (EMT), is essential during development, and occurs in pathological contexts, such as in fibrosis and cancer progression. Although EMT can be induced by many extracellular ligands, TGF-β and TGF-β-related proteins have emerged as major inducers of this transdifferentiation process in development and cancer. Additionally, it is increasingly apparent that signaling pathways cooperate in the execution of EMT. This update summarizes the current knowledge of the coordination of TGF-β-induced Smad and non-Smad signaling pathways in EMT, and the remarkable ability of Smads to cooperate with other transcription-directed signaling pathways in the control of gene reprogramming during EMT. Copyright © 2014 Elsevier Ltd. All rights reserved.
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                Author and article information

                Contributors
                cxwang@sdu.edu.cn
                Journal
                Thorac Cancer
                Thorac Cancer
                10.1111/(ISSN)1759-7714
                TCA
                Thoracic Cancer
                John Wiley & Sons Australia, Ltd (Melbourne )
                1759-7706
                1759-7714
                09 July 2020
                September 2020
                : 11
                : 9 ( doiID: 10.1111/tca.v11.9 )
                : 2506-2516
                Affiliations
                [ 1 ] Department of Clinical Laboratory Qilu Hospital of Shandong University Jinan China
                [ 2 ] Department of Clinical Laboratory The Second Hospital of Shandong University Jinan China
                [ 3 ] Department of Thoracic Surgery Qilu Hospital of Shandong University Jinan China
                [ 4 ] School of Life Science and Technology Harbin Institute of Technology Harbin China
                Author notes
                [*] [* ] Correspondence

                Chuanxin Wang, Department of Clinical Laboratry, The Second Hospital of Shandong University, 247 Beiyuan Street, Jinan 250033, China.

                Tel: +86 531 8587 5002

                Fax: +86 531 8896 2544

                Email: cxwang@ 123456sdu.edu.cn

                Author information
                https://orcid.org/0000-0002-3796-6293
                Article
                TCA13562
                10.1111/1759-7714.13562
                7471025
                32643848
                932bbb85-093d-4b5e-b8f5-8a7806af6264
                © 2020 The Authors. Thoracic Cancer published by China Lung Oncology Group and John Wiley & Sons Australia, Ltd

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 31 May 2020
                : 17 June 2020
                : 17 June 2020
                Page count
                Figures: 7, Tables: 0, Pages: 11, Words: 5535
                Funding
                Funded by: Jinan Science and Technology Plan, Clinical Medical Technology Innovation Plan
                Award ID: 201805061
                Funded by: Key Research and Development Project of Shandong Province
                Award ID: 2019GSF108034
                Funded by: Taishan Scholar Program of Shandong Province
                Funded by: The Fundamental Research Funds of Shandong University
                Award ID: 2018JC002
                Funded by: Innovative Research Group Project of the National Natural Science Foundation of China , open-funder-registry 10.13039/100014718;
                Award ID: 81702084
                Funded by: Research and Development National Natural Science Foundation of China , open-funder-registry 10.13039/501100001809;
                Funded by: Shandong University , open-funder-registry 10.13039/100009108;
                Categories
                Original Article
                Original Articles
                Custom metadata
                2.0
                September 2020
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.8.9 mode:remove_FC converted:03.09.2020

                epithelial‐mesenchymal transition,linc02323,lung adenocarcinoma,mir‐1343‐3p,tgf‐β receptor 1

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