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      Karyopherin Msn5 is involved in a novel mechanism controlling the cellular level of cell cycle regulators Cln2 and Swi5

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          ABSTRACT

          The yeast β-karyopherin Msn5 controls the SBF cell-cycle transcription factor, responsible for the periodic expression of CLN2 cyclin gene at G1/S, and the nuclear export of Cln2 protein. Here we show that Msn5 regulates Cln2 by an additional mechanism. Inactivation of Msn5 causes a severe reduction in the cellular content of Cln2. This occurs by a post-transcriptional mechanism, since CLN2 mRNA level is not importantly affected in asynchronous cultures. Cln2 stability is not significantly altered in msn5 cells and inactivation of Msn5 causes a reduction in protein level even when Cln2 is stabilized. Therefore, the reduced amount of Cln2 in msn5 cells is mainly due not to a higher rate of protein degradation but to a defect in Cln2 synthesis. In fact, analysis of polysome profiles indicated that Msn5 inactivation causes a shift of CLN2 and SWI5 mRNAs from heavy-polysomal to light-polysomal and non-polysomal fractions, supporting a defect in Cln2 and Swi5 protein synthesis in the msn5 mutant. The analysis of truncated versions of Cln2 and of chimeric cyclins combining distinct domains from Cln2 and the related Cln1 cyclin identified an internal region in Cln2 from 181 to 225 residues that when fused to GFP is able to confer Msn5-dependent regulation of protein cellular content. Finally, we showed that a high level of Cln2 is toxic in the absence of Msn5. In summary, we described that Msn5 is required for the proper protein synthesis of specific proteins, introducing a new level of control of cell cycle regulators.

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          Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae.

          The cyclin-dependent protein kinase (CDK) encoded by CDC28 is the master regulator of cell division in the budding yeast Saccharomyces cerevisiae. By mechanisms that, for the most part, remain to be delineated, Cdc28 activity controls the timing of mitotic commitment, bud initiation, DNA replication, spindle formation, and chromosome separation. Environmental stimuli and progress through the cell cycle are monitored through checkpoint mechanisms that influence Cdc28 activity at key cell cycle stages. A vast body of information concerning how Cdc28 activity is timed and coordinated with various mitotic events has accrued. This article reviews that literature. Following an introduction to the properties of CDKs common to many eukaryotic species, the key influences on Cdc28 activity-cyclin-CKI binding and phosphorylation-dephosphorylation events-are examined. The processes controlling the abundance and activity of key Cdc28 regulators, especially transcriptional and proteolytic mechanisms, are then discussed in detail. Finally, the mechanisms by which environmental stimuli influence Cdc28 activity are summarized.
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            Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor.

            In yeast, environmental conditions control the transcription factor Msn2, the nuclear accumulation and function of which serve as a sensitive indicator of nutrient availablity and environmental stress load. We show here that the nuclear localization signal (NLS) of Msn2 is a direct target of cAMP-dependent protein kinase (cAPK). Genetic analysis suggests that Msn2-NLS function is inhibited by phosphorylation and activated by dephosphorylation. Msn2-NLS function is unaffected by many stress conditions that normally induce nuclear accumulation of full-length Msn2. The Msn2-NLS phosphorylation status is, however, highly sensitive to carbohydrate fluctuations during fermentative growth. Dephosphorylation occurs in >2 min after glucose withdrawal but the effect is reversed rapidly by refeeding with glucose. This response to glucose depletion is due to changes in cAPK activity rather than an increase in protein phosphatase activity. Surprisingly, the classical glucose-sensing systems are not connected to this rapid response system. Our results further imply that generic stress signals do not cause short-term depressions in cAPK activity. They operate on Msn2 by affecting an Msn5-dependent nuclear export and/or retention mechanism.
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              A Novel Class of RanGTP Binding Proteins

              The importin-α/β complex and the GTPase Ran mediate nuclear import of proteins with a classical nuclear localization signal. Although Ran has been implicated also in a variety of other processes, such as cell cycle progression, a direct function of Ran has so far only been demonstrated for importin-mediated nuclear import. We have now identified an entire class of ∼20 potential Ran targets that share a sequence motif related to the Ran-binding site of importin-β. We have confirmed specific RanGTP binding for some of them, namely for two novel factors, RanBP7 and RanBP8, for CAS, Pse1p, and Msn5p, and for the cell cycle regulator Cse1p from Saccharomyces cerevisiae. We have studied RanBP7 in more detail. Similar to importin-β, it prevents the activation of Ran's GTPase by RanGAP1 and inhibits nucleotide exchange on RanGTP. RanBP7 binds directly to nuclear pore complexes where it competes for binding sites with importin-β, transportin, and apparently also with the mediators of mRNA and U snRNA export. Furthermore, we provide evidence for a Ran-dependent transport cycle of RanBP7 and demonstrate that RanBP7 can cross the nuclear envelope rapidly and in both directions. On the basis of these results, we propose that RanBP7 might represent a nuclear transport factor that carries an as yet unknown cargo, which could apply as well for this entire class of related RanGTP-binding proteins.
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                Author and article information

                Journal
                Cell Cycle
                Cell Cycle
                KCCY
                kccy20
                Cell Cycle
                Taylor & Francis
                1538-4101
                1551-4005
                2019
                11 February 2019
                11 February 2019
                : 18
                : 5
                : 580-595
                Affiliations
                [a ]Departament de Bioquímica i Biologia Molecular, Universitat de València , Valencia, Spain
                [b ]Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València , Valencia, Spain
                Author notes
                CONTACT J. Carlos Igual jcigual@ 123456uv.es
                [*]

                These authors contributed equally to this work

                [†]

                Present address: Institute of Pharmacology, Heidelberg University, Im Neuenheimer Feld 366, 69120 Heidelberg, Germany and EMBL Monterotondo, Via Ramarini 32, 00016 Monterotondo, Italy.

                [‡]

                Present address: Departamento de Ciencias Naturales, Exactas y Estadística, Facultad de Ciencias Biológicas, Universidad Santiago de Cali. Calle 5 nº 62-00, 760035 Santiago de Cali, Colombia.

                Author information
                http://orcid.org/0000-0003-1472-2373
                http://orcid.org/0000-0001-6910-5845
                Article
                1578148
                10.1080/15384101.2019.1578148
                6464581
                30739521
                937cad02-be90-430f-aaa3-08294d094381
                © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License ( http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.

                History
                : 11 September 2018
                : 10 December 2018
                : 12 December 2018
                Page count
                Figures: 6, References: 54, Pages: 16
                Funding
                Funded by: Spanish Government and co-financed by ERDF from the European Union
                Award ID: BFU2014-58429-P
                Funded by: JCI 10.13039/501100004025
                Award ID: BFU2013-48643-C3-3-P
                Funded by: Generalitat Valenciana 10.13039/501100003359
                Award ID: GVPROMETEO2016-123 to JCI
                This work was supported by Spanish Government and co-financed by ERDF from the European Union under Grants number BFU2014-58429-P and BFU2017-88692-P to JCI and BFU2013-48643-C3-3-P and BFU2016-77728-C3-3-P to PA; Generalitat Valenciana under Grant number GVPROMETEO2016-123 to JCI.
                Categories
                Research Paper

                Cell biology
                cell cycle,msn5 karyopherin,cln2 cyclin,swi5,s. cerevisiae
                Cell biology
                cell cycle, msn5 karyopherin, cln2 cyclin, swi5, s. cerevisiae

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