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      Tunable p K a values and the basis of opposite charge selectivities in nicotinic-type receptors

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          Abstract

          Among ion channels, only the nicotinic-receptor superfamily has evolved to generate both cation- and anion-selective members. Although other, structurally unrelated, neurotransmitter-gated cation channels exist, no other type of neurotransmitter-gated anion channel, and thus no other source of fast synaptic inhibitory signals, has been described so far. In addition to the seemingly straightforward electrostatic effect of the presence (in the cation-selective members) or absence (in the anion-selective ones) of a ring of pore-facing carboxylates, mutational studies have identified other features of the amino-acid sequence near the intracellular end of the pore-lining transmembrane segments (M2) that are also required to achieve the high charge selectivity displayed by native channels 110 . However, the mechanism underlying this subtler effect has remained elusive 11 and a subject of much speculation. Here, using single-channel electrophysiological recordings to estimate the protonation state of native ionizable side chains, we show that anion-selective type sequences favour, whereas cation-selective type sequences prevent, the protonation of the conserved, buried basic residues at the intracellular entrance of the pore (the M2 0′ position). We conclude that the, previously unrecognized, tunable charge state of the 0′ ring of buried basic side chains is an essential feature of these channels’ versatile charge-selectivity filter.

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          Most cited references31

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          Cloning of an avermectin-sensitive glutamate-gated chloride channel from Caenorhabditis elegans.

          The avermectins are a family of macrocyclic lactones used in the control of nematode and arthropod parasites. Ivermectin (22,23-dihydroavermectin B1a) is widely used as an anthelmintic in veterinary medicine and is used to treat onchocerciasis or river blindness in humans. Abamectin (avermectin B1a) is a miticide and insecticide used in crop protection. Avermectins interact with vertebrate and invertebrate GABA receptors and invertebrate glutamate-gated chloride channels. The soil nematode Caenorhabditis elegans has served as a useful model to study the mechanism of action of avermectins. A C. elegans messenger RNA expressed in Xenopus oocytes encodes an avermectin-sensitive glutamate-gated chloride channel. To elucidate the structure and properties of this channel, we used Xenopus oocytes for expression cloning of two functional complementary DNAs encoding an avermectin-sensitive glutamate-gated chloride channel. We find that the electrophysiological and structural properties of these proteins indicate that they are new members of the ligand-gated ion channel superfamily.
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            Estimating single-channel kinetic parameters from idealized patch-clamp data containing missed events.

            We present here a maximal likelihood algorithm for estimating single-channel kinetic parameters from idealized patch-clamp data. The algorithm takes into account missed events caused by limited time resolution of the recording system. Assuming a fixed dead time, we derive an explicit expression for the corrected transition rate matrix by generalizing the theory of Roux and Sauve (1985, Biophys. J. 48:149-158) to the case of multiple conductance levels. We use a variable metric optimizer with analytical derivatives for rapidly maximizing the likelihood. The algorithm is applicable to data containing substates and multiple identical or nonidentical channels. It allows multiple data sets obtained under different experimental conditions, e.g., concentration, voltage, and force, to be fit simultaneously. It also permits a variety of constraints on rate constants and provides standard errors for all estimates of model parameters. The algorithm has been tested extensively on a variety of kinetic models with both simulated and experimental data. It is very efficient and robust; rate constants for a multistate model can often be extracted in a processing time of approximately 1 min, largely independent of the starting values.
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              Liquid junction potentials and small cell effects in patch-clamp analysis.

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                Author and article information

                Journal
                0410462
                6011
                Nature
                Nature
                Nature
                0028-0836
                1476-4687
                23 March 2011
                22 May 2011
                23 December 2011
                : 474
                : 7352
                : 526-530
                Affiliations
                [1 ] Department of Molecular and Integrative Physiology, Center for Biophysics and Computational Biology, and Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
                Author notes
                Correspondence should be addressed to C.G. 407 S. Goodwin Ave., 524 Burrill Hall, Urbana, IL 61801. grosman@ 123456illinois.edu
                Article
                nihpa282586
                10.1038/nature10015
                3121909
                21602825
                93a5751e-fb85-4f49-9aad-722994ccd449

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                History
                Funding
                Funded by: National Institute of Neurological Disorders and Stroke : NINDS
                Award ID: R01 NS042169-07 || NS
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