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      A new species of Viola (Violaceae) from Guangdong Province, China

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          Abstract

          Viola huizhouensis ( Violaceae ), a new species from Xiangtoushan National Nature Reserve of Guangdong Province in China, is described and illustrated. The new species is most similar to V. guangzhouensis , but it can be easily distinguished by its much stouter rhizome, lack of aerial stem, dense pubescence of the basal pedicel and the whole plant. Our phylogenetic analysis, based on ITS sequences, confirms that the new species belongs to V. sect. Diffusae .

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          MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

          Koichiro Tamura, Glen Stecher, Daniel Walter Peterson … (2013)
          We announce the release of an advanced version of the Molecular Evolutionary Genetics Analysis (MEGA) software, which currently contains facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis. In version 6.0, MEGA now enables the inference of timetrees, as it implements the RelTime method for estimating divergence times for all branching points in a phylogeny. A new Timetree Wizard in MEGA6 facilitates this timetree inference by providing a graphical user interface (GUI) to specify the phylogeny and calibration constraints step-by-step. This version also contains enhanced algorithms to search for the optimal trees under evolutionary criteria and implements a more advanced memory management that can double the size of sequence data sets to which MEGA can be applied. Both GUI and command-line versions of MEGA6 can be downloaded from www.megasoftware.net free of charge.
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            IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

            Bui Minh, Heiko Schmidt, Olga Chernomor … (2020)
            Abstract IQ-TREE (http://www.iqtree.org, last accessed February 6, 2020) is a user-friendly and widely used software package for phylogenetic inference using maximum likelihood. Since the release of version 1 in 2014, we have continuously expanded IQ-TREE to integrate a plethora of new models of sequence evolution and efficient computational approaches of phylogenetic inference to deal with genomic data. Here, we describe notable features of IQ-TREE version 2 and highlight the key advantages over other software.
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              AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS

              T.J White, T. Bruns, S. Lee … (1990)
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                Author and article information

                Contributors
                Yan-Shuang Huang: Role: InvestigationRole: MethodologyRole: Writing - original draft
                Ning Kang: Role: Data curationRole: Visualization
                Xiang-Jing Zhong: Role: Resources
                Wen-Bo Liao: Role: Project administration
                Qiang Fan:
                ORCID: https://orcid.org/0000-0003-4254-6936
                Role: Funding acquisition
                Journal
                Journal ID (nlm-ta): PhytoKeys
                Journal ID (iso-abbrev): PhytoKeys
                Journal ID (publisher-id): 3
                Journal ID (index): urn:lsid:arphahub.com:pub:F7FCE910-8E78-573F-9C77-7788555F8AAD
                Title: PhytoKeys
                Publisher: Pensoft Publishers
                ISSN (Print): 1314-2011
                ISSN (Electronic): 1314-2003
                Publication date Collection: 2021
                Publication date (Electronic): 16 April 2021
                Volume: 176
                Pages: 67-76
                Affiliations
                [1 ] State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China Sun Yat-sen University Guangzhou China
                [2 ] Management Bureau of Guangdong Xiangtoushan National Nature Reserve, Huizhou 516003, China Guangdong Xiangtoushan National Nature Reserve Huizhou China
                Author notes
                Corresponding author: Qiang Fan ( fanqiang@ 123456mail.sysu.edu.cn )

                Academic editor: A. Sennikov

                Author information
                https://orcid.org/0000-0003-4254-6936
                Article
                Publisher ID: 65443
                DOI: 10.3897/phytokeys.176.65443
                PMC ID: 8065024
                PubMed ID: 33958940
                SO-VID: 9453a217-dc27-42b7-853e-4583fd37c929
                Copyright © Yan-Shuang Huang, Ning Kang, Xiang-Jing Zhong, Wen-Bo Liao, Qiang Fan
                License:

                This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                Date received : 03 March 2021
                Date accepted : 24 March 2021
                Categories
                Subject: Research Article
                Subject: Violaceae
                Subject: Biodiversity & Conservation
                Subject: Taxonomy
                Subject: Cenozoic
                Subject: Neogene
                Subject: Asia
                Subject: China Seas
                Subject: Far East

                ScienceOpen disciplines: Plant science & Botany
                Keywords: morphology,new species,phylogeny,section diffusae,viola huizhouensis
                Data availability:
                ScienceOpen disciplines: Plant science & Botany
                Keywords: morphology, new species, phylogeny, section diffusae, viola huizhouensis

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