30
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      A Theory of Rate Coding Control by Intrinsic Plasticity Effects

      research-article
      1 , 2 , 3 , 1 , *
      PLoS Computational Biology
      Public Library of Science

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Intrinsic plasticity (IP) is a ubiquitous activity-dependent process regulating neuronal excitability and a cellular correlate of behavioral learning and neuronal homeostasis. Because IP is induced rapidly and maintained long-term, it likely represents a major determinant of adaptive collective neuronal dynamics. However, assessing the exact impact of IP has remained elusive. Indeed, it is extremely difficult disentangling the complex non-linear interaction between IP effects, by which conductance changes alter neuronal activity, and IP rules, whereby activity modifies conductance via signaling pathways. Moreover, the two major IP effects on firing rate, threshold and gain modulation, remain unknown in their very mechanisms. Here, using extensive simulations and sensitivity analysis of Hodgkin-Huxley models, we show that threshold and gain modulation are accounted for by maximal conductance plasticity of conductance that situate in two separate domains of the parameter space corresponding to sub- and supra-threshold conductance (i.e. activating below or above the spike onset threshold potential). Analyzing equivalent integrate-and-fire models, we provide formal expressions of sensitivities relating to conductance parameters, unraveling unprecedented mechanisms governing IP effects. Our results generalize to the IP of other conductance parameters and allow strong inference for calcium-gated conductance, yielding a general picture that accounts for a large repertoire of experimental observations. The expressions we provide can be combined with IP rules in rate or spiking models, offering a general framework to systematically assess the computational consequences of IP of pharmacologically identified conductance with both fine grain description and mathematical tractability. We provide an example of such IP loop model addressing the important issue of the homeostatic regulation of spontaneous discharge. Because we do not formulate any assumptions on modification rules, the present theory is also relevant to other neural processes involving excitability changes, such as neuromodulation, development, aging and neural disorders.

          Author Summary

          Over the past decades, experimental and theoretical studies of the cellular basis of learning and memory have mainly focused on synaptic plasticity, the experience-dependent modification of synapses. However, behavioral learning has also been correlated with experience-dependent changes of non-synaptic voltage-dependent ion channels. This intrinsic plasticity changes the neuron's propensity to fire action potentials in response to synaptic inputs. Thus a fundamental problem is to relate changes of the neuron input-output function with voltage-gated conductance modifications. Using a sensitivity analysis in biophysically realistic models, we depict a generic dichotomy between two classes of voltage-dependent ion channels. These two classes modify the threshold and the slope of the neuron input-output relation, allowing neurons to regulate the range of inputs they respond to and the gain of that response, respectively. We further provide analytical descriptions that enlighten the dynamical mechanisms underlying these effects and propose a concise and realistic framework for assessing the computational impact of intrinsic plasticity in neuron network models. Our results account for a large repertoire of empirical observations and may enlighten functional changes that characterize development, aging and several neural diseases, which also involve changes in voltage-dependent ion channels.

          Related collections

          Most cited references93

          • Record: found
          • Abstract: found
          • Article: not found

          Variability, compensation and homeostasis in neuron and network function.

          Neurons in most animals live a very long time relative to the half-lives of all of the proteins that govern excitability and synaptic transmission. Consequently, homeostatic mechanisms are necessary to ensure stable neuronal and network function over an animal's lifetime. To understand how these homeostatic mechanisms might function, it is crucial to understand how tightly regulated synaptic and intrinsic properties must be for adequate network performance, and the extent to which compensatory mechanisms allow for multiple solutions to the production of similar behaviour. Here, we use examples from theoretical and experimental studies of invertebrates and vertebrates to explore several issues relevant to understanding the precision of tuning of synaptic and intrinsic currents for the operation of functional neuronal circuits.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            NEURAL EXCITABILITY, SPIKING AND BURSTING

            Bifurcation mechanisms involved in the generation of action potentials (spikes) by neurons are reviewed here. We show how the type of bifurcation determines the neuro-computational properties of the cells. For example, when the rest state is near a saddle-node bifurcation, the cell can fire all-or-none spikes with an arbitrary low frequency, it has a well-defined threshold manifold, and it acts as an integrator; i.e. the higher the frequency of incoming pulses, the sooner it fires. In contrast, when the rest state is near an Andronov–Hopf bifurcation, the cell fires in a certain frequency range, its spikes are not all-or-none, it does not have a well-defined threshold manifold, it can fire in response to an inhibitory pulse, and it acts as a resonator; i.e. it responds preferentially to a certain (resonant) frequency of the input. Increasing the input frequency may actually delay or terminate its firing. We also describe the phenomenon of neural bursting, and we use geometric bifurcation theory to extend the existing classification of bursters, including many new types. We discuss how the type of burster defines its neuro-computational properties, and we show that different bursters can interact, synchronize and process information differently.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Simulation of networks of spiking neurons: a review of tools and strategies.

              We review different aspects of the simulation of spiking neural networks. We start by reviewing the different types of simulation strategies and algorithms that are currently implemented. We next review the precision of those simulation strategies, in particular in cases where plasticity depends on the exact timing of the spikes. We overview different simulators and simulation environments presently available (restricted to those freely available, open source and documented). For each simulation tool, its advantages and pitfalls are reviewed, with an aim to allow the reader to identify which simulator is appropriate for a given task. Finally, we provide a series of benchmark simulations of different types of networks of spiking neurons, including Hodgkin-Huxley type, integrate-and-fire models, interacting with current-based or conductance-based synapses, using clock-driven or event-driven integration strategies. The same set of models are implemented on the different simulators, and the codes are made available. The ultimate goal of this review is to provide a resource to facilitate identifying the appropriate integration strategy and simulation tool to use for a given modeling problem related to spiking neural networks.
                Bookmark

                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS Comput Biol
                plos
                ploscomp
                PLoS Computational Biology
                Public Library of Science (San Francisco, USA )
                1553-734X
                1553-7358
                January 2012
                January 2012
                19 January 2012
                : 8
                : 1
                : e1002349
                Affiliations
                [1 ]Institut des Systèmes Intelligents et de Robotique, CNRS – UMR 7222, Université Pierre et Marie Curie (UPMC), Paris, France
                [2 ]Department of Neurology & Neurological Sciences, Stanford University Medical Center, Stanford, California, United States of America
                [3 ]Project-Team BEAGLE, INRIA Rhone-Alpes, LIRIS UMR5205, Université de Lyon, Lyon, France
                Indiana University, United States of America
                Author notes

                Conceived and designed the experiments: JN JTP BD. Performed the experiments: JN BD. Analyzed the data: JN BD. Contributed reagents/materials/analysis tools: JN HB BD. Wrote the paper: JN JTP HB BD.

                Article
                PCOMPBIOL-D-11-00967
                10.1371/journal.pcbi.1002349
                3261921
                22275858
                952a4d1f-d268-4bf2-b054-99895a9d51f7
                Naudé et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
                History
                : 4 July 2011
                : 27 November 2011
                Page count
                Pages: 15
                Categories
                Research Article
                Biology
                Biophysics
                Computational Biology
                Neuroscience
                Systems Biology
                Theoretical Biology
                Computer Science
                Computer Modeling
                Computerized Simulations

                Quantitative & Systems biology
                Quantitative & Systems biology

                Comments

                Comment on this article