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      WGS accurately predicts antimicrobial resistance in Escherichia coli.

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          Abstract

          The objective of this study was to determine the effectiveness of WGS in identifying resistance genotypes of MDR Escherichia coli and whether these correlate with observed phenotypes.

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          Author and article information

          Journal
          J. Antimicrob. Chemother.
          The Journal of antimicrobial chemotherapy
          1460-2091
          0305-7453
          Oct 2015
          : 70
          : 10
          Affiliations
          [1 ] Division of Animal and Food Microbiology, Office of Research, Center for Veterinary Medicine, US Food and Drug Administration, Laurel, MD, USA.
          [2 ] International Center for Food Industry Excellence, Department of Animal and Food Sciences, Texas Tech University, Lubbock, TX, USA.
          [3 ] Food and Feed Safety Research Unit, Agricultural Research Service, US Department of Agriculture, College Station, TX, USA.
          [4 ] Center for Food Safety and Applied Nutrition, US Food and Drug Administration, College Park, MD, USA.
          [5 ] US Meat Animal Research Center, Agricultural Research Service, US Department of Agriculture, Clay Center, NE, USA.
          [6 ] Division of Animal and Food Microbiology, Office of Research, Center for Veterinary Medicine, US Food and Drug Administration, Laurel, MD, USA shaohua.zhao@fda.hhs.gov.
          Article
          dkv186
          10.1093/jac/dkv186
          26142410
          Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy 2015. This work is written by (a) US Government employee(s) and is in the public domain in the US.

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