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      Expression Profile of Cell Cycle-Related Genes in Human Fibroblasts Exposed Simultaneously to Radiation and Simulated Microgravity

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          Abstract

          Multiple unique environmental factors such as space radiation and microgravity (μ G) pose a serious threat to human gene stability during space travel. Recently, we reported that simultaneous exposure of human fibroblasts to simulated μ G and radiation results in more chromosomal aberrations than in cells exposed to radiation alone. However, the mechanisms behind this remain unknown. The purpose of this study was thus to obtain comprehensive data on gene expression using a three-dimensional clinostat synchronized to a carbon (C)-ion or X-ray irradiation system. Human fibroblasts (1BR-hTERT) were maintained under standing or rotating conditions for 3 or 24 h after synchronized C-ion or X-ray irradiation at 1 Gy as part of a total culture time of 2 days. Among 57,773 genes analyzed with RNA sequencing, we focused particularly on the expression of 82 cell cycle-related genes after exposure to the radiation and simulated μ G. The expression of cell cycle-suppressing genes ( ABL1 and CDKN1A) decreased and that of cell cycle-promoting genes ( CCNB1, CCND1, KPNA2, MCM4, MKI67, and STMN1) increased after C-ion irradiation under μ G. The cell may pass through the G 1/S and G 2 checkpoints with DNA damage due to the combined effects of C-ions and μ G, suggesting that increased genomic instability might occur in space.

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          Most cited references74

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          The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight.

          To understand the health impact of long-duration spaceflight, one identical twin astronaut was monitored before, during, and after a 1-year mission onboard the International Space Station; his twin served as a genetically matched ground control. Longitudinal assessments identified spaceflight-specific changes, including decreased body mass, telomere elongation, genome instability, carotid artery distension and increased intima-media thickness, altered ocular structure, transcriptional and metabolic changes, DNA methylation changes in immune and oxidative stress-related pathways, gastrointestinal microbiota alterations, and some cognitive decline postflight. Although average telomere length, global gene expression, and microbiome changes returned to near preflight levels within 6 months after return to Earth, increased numbers of short telomeres were observed and expression of some genes was still disrupted. These multiomic, molecular, physiological, and behavioral datasets provide a valuable roadmap of the putative health risks for future human spaceflight.
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            A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression.

            Chromosome correlation maps display correlations between the expression patterns of genes on the same chromosome. Using these maps, we show here that adjacent pairs of genes, as well as nearby non-adjacent pairs of genes, show correlated expression independent of their orientation. We present specific examples of adjacent pairs with highly correlated expression patterns, in which the promoter of only one of the two genes contains an upstream activating sequence (UAS) known to be associated with that expression pattern. Finally, we show that genes with similar functions tend to occur in adjacent positions along the chromosomes. Our results suggest that, in certain chromosomal expression domains, an UAS can affect the transcription of genes that are not immediately downstream from it.
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              Measurements of energetic particle radiation in transit to Mars on the Mars Science Laboratory.

              The Mars Science Laboratory spacecraft, containing the Curiosity rover, was launched to Mars on 26 November 2011, and for most of the 253-day, 560-million-kilometer cruise to Mars, the Radiation Assessment Detector made detailed measurements of the energetic particle radiation environment inside the spacecraft. These data provide insights into the radiation hazards that would be associated with a human mission to Mars. We report measurements of the radiation dose, dose equivalent, and linear energy transfer spectra. The dose equivalent for even the shortest round-trip with current propulsion systems and comparable shielding is found to be 0.66 ± 0.12 sievert.
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                Author and article information

                Journal
                Int J Mol Sci
                Int J Mol Sci
                ijms
                International Journal of Molecular Sciences
                MDPI
                1422-0067
                26 September 2019
                October 2019
                : 20
                : 19
                : 4791
                Affiliations
                [1 ]Gunma University Heavy Ion Medical Center, Maebashi, Gunma 371-8511, Japan; hi-ikeda@ 123456gunma-u.ac.jp (H.I.); souda@ 123456med.id.yamagata-u.ac.jp (H.S.); yyukari@ 123456gunma-u.ac.jp (Y.Y.)
                [2 ]Department of Genome Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki 305-8577, Japan; muratani@ 123456md.tsukuba.ac.jp
                [3 ]Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi 980-8577, Japan; j-hidema@ 123456ige.tohoku.ac.jp
                [4 ]Radiation Institute for Science & Engineering, Prairie View A&M University, Prairie View, TX 77446, USA; mehada@ 123456pvamu.edu
                [5 ]Department of Cardiology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA; KFujiwara1@ 123456mdanderson.org
                Author notes
                [* ]Correspondence: a-takahashi@ 123456gunma-u.ac.jp ; Tel.: +81-27-220-7917
                [†]

                Current address: Gunma University Initiative for Advanced Research, Maebashi, Gunma 371-8511, Japan.

                [‡]

                Current address: Department of Heavy Particle Medical Science, Graduate School of Medical Science, Yamagata University, Yamagata, Yamagata 990-9585, Japan.

                Author information
                https://orcid.org/0000-0001-9129-7433
                https://orcid.org/0000-0002-0276-8000
                https://orcid.org/0000-0002-8523-9111
                https://orcid.org/0000-0002-9960-2153
                Article
                ijms-20-04791
                10.3390/ijms20194791
                6801845
                31561588
                96c64db2-2c92-445f-889d-33ca6d4af0d3
                © 2019 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 09 August 2019
                : 24 September 2019
                Categories
                Article

                Molecular biology
                simulated microgravity,radiation,combined effects,gene expression,cell cycle
                Molecular biology
                simulated microgravity, radiation, combined effects, gene expression, cell cycle

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