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      Abeta42-Induced Neurodegeneration via an Age-Dependent Autophagic-Lysosomal Injury in Drosophila

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          Abstract

          The mechanism of widespread neuronal death occurring in Alzheimer's disease (AD) remains enigmatic even after extensive investigation during the last two decades. Amyloid beta 42 peptide (Aβ 1–42) is believed to play a causative role in the development of AD. Here we expressed human Aβ 1–42 and amyloid beta 40 (Aβ 1–40) in Drosophila neurons. Aβ 1–42 but not Aβ 1–40 causes an extensive accumulation of autophagic vesicles that become increasingly dysfunctional with age. Aβ 1–42-induced impairment of the degradative function, as well as the structural integrity, of post-lysosomal autophagic vesicles triggers a neurodegenerative cascade that can be enhanced by autophagy activation or partially rescued by autophagy inhibition. Compromise and leakage from post-lysosomal vesicles result in cytosolic acidification, additional damage to membranes and organelles, and erosive destruction of cytoplasm leading to eventual neuron death. Neuronal autophagy initially appears to play a pro-survival role that changes in an age-dependent way to a pro-death role in the context of Aβ 1–42 expression. Our in vivo observations provide a mechanistic understanding for the differential neurotoxicity of Aβ 1–42 and Aβ 1–40, and reveal an Aβ 1–42-induced death execution pathway mediated by an age-dependent autophagic-lysosomal injury.

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          Role and regulation of starvation-induced autophagy in the Drosophila fat body.

          In response to starvation, eukaryotic cells recover nutrients through autophagy, a lysosomal-mediated process of cytoplasmic degradation. Autophagy is known to be inhibited by TOR signaling, but the mechanisms of autophagy regulation and its role in TOR-mediated cell growth are unclear. Here, we show that signaling through TOR and its upstream regulators PI3K and Rheb is necessary and sufficient to suppress starvation-induced autophagy in the Drosophila fat body. In contrast, TOR's downstream effector S6K promotes rather than suppresses autophagy, suggesting S6K downregulation may limit autophagy during extended starvation. Despite the catabolic potential of autophagy, disruption of conserved components of the autophagic machinery, including ATG1 and ATG5, does not restore growth to TOR mutant cells. Instead, inhibition of autophagy enhances TOR mutant phenotypes, including reduced cell size, growth rate, and survival. Thus, in cells lacking TOR, autophagy plays a protective role that is dominant over its potential role as a growth suppressor.
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            Processing of gene expression data generated by quantitative real-time RT-PCR.

            Quantitative real-time PCR represents a highly sensitive and powerful technique for the quantitation of nucleic acids. It has a tremendous potential for the high-throughput analysis of gene expression in research and routine diagnostics. However, the major hurdle is not the practical performance of the experiments themselves but rather the efficient evaluation and the mathematical and statistical analysis of the enormous amount of data gained by this technology, as these functions are not included in the software provided by the manufacturers of the detection systems. In this work, we focus on the mathematical evaluation and analysis of the data generated by quantitative real-time PCR, the calculation of the final results, the propagation of experimental variation of the measured values to the final results, and the statistical analysis. We developed a Microsoft Excel-based software application coded in Visual Basic for Applications, called Q-Gene, which addresses these points. Q-Gene manages and expedites the planning, performance, and evaluation of quantitative real-time PCR experiments, as well as the mathematical and statistical analysis, storage, and graphical presentation of the data. The Q-Gene software application is a tool to cope with complex quantitative real-time PCR experiments at a high-throughput scale and considerably expedites and rationalizes the experimental setup, data analysis, and data management while ensuring highest reproducibility.
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              Atg7-dependent autophagy promotes neuronal health, stress tolerance, and longevity but is dispensable for metamorphosis in Drosophila.

              Autophagy, a cellular process of cytoplasmic degradation and recycling, is induced in Drosophila larval tissues during metamorphosis, potentially contributing to their destruction or reorganization. Unexpectedly, we find that flies lacking the core autophagy regulator Atg7 are viable, despite severe defects in autophagy. Although metamorphic cell death is perturbed in Atg7 mutants, the larval-adult midgut transition proceeds normally, with extended pupal development compensating for reduced autophagy. Atg7-/- adults are short-lived, hypersensitive to nutrient and oxidative stress, and accumulate ubiquitin-positive aggregates in degenerating neurons. Thus, normal levels of autophagy are crucial for stress survival and continuous cellular renewal, but not metamorphosis.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, USA )
                1932-6203
                2009
                15 January 2009
                : 4
                : 1
                : e4201
                Affiliations
                [1 ]Division of Neuroscience, Beckman Research Institute of the City of Hope, Duarte, California, United States of America
                [2 ]Graduate School of Biological Science, Beckman Research Institute of the City of Hope, Duarte, California, United States of America
                [3 ]Department of Developmental and Molecular Pathway, Novartis Institute for Biomedical Research, Cambridge, Massachusetts, United States of America
                [4 ]Department of Genetics, University of Minnesota, Minneapolis, Minnesota, United States of America
                National Institutes of Health, United States of America
                Author notes

                Conceived and designed the experiments: DL PMS. Performed the experiments: DL. Analyzed the data: DL PMS. Contributed reagents/materials/analysis tools: DL HJS DG TN PMS. Wrote the paper: DL PMS. Provided experimental suggestions: HJS DG TN.

                Article
                08-PONE-RA-06031R3
                10.1371/journal.pone.0004201
                2626277
                19145255
                97844a31-3c8c-454d-b974-a4328999dee5
                Ling et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
                History
                : 19 August 2008
                : 2 December 2008
                Page count
                Pages: 11
                Categories
                Research Article
                Cell Biology/Cellular Death and Stress Responses
                Neuroscience/Neurobiology of Disease and Regeneration
                Neurological Disorders/Alzheimer Disease
                Pathology/Neuropathology

                Uncategorized
                Uncategorized

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