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      msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design.

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      Molecular ecology resources
      Wiley

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          Abstract

          msatcommander is a platform-independent program designed to search for microsatellite arrays, design primers, and tag primers using an automated routine. msatcommander accepts as input DNA sequence data in single-sequence or concatenated, fasta-formatted files. Search data and locus-specific primers are written to comma-separated value files for subsequent use in spreadsheet or database programs. Binary versions of the graphical interface for msatcommander are available for Apple OS X and Windows XP. Users of other operating systems may run the graphical interface version using the available source code, provided their environment supports at least Python 2.4, Biopython 1.43, and wxPython 2.8. msatcommander is available from http://code.google.com/p/msatcommander/.

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          Author and article information

          Journal
          Mol Ecol Resour
          Molecular ecology resources
          Wiley
          1755-098X
          1755-098X
          Jan 2008
          : 8
          : 1
          Affiliations
          [1 ] D. B. Warnell School of Forestry and Natural Resources, The University of Georgia, Athens, GA 30602, USA.
          Article
          10.1111/j.1471-8286.2007.01884.x
          21585724
          97d8e538-0e0c-4fb9-8657-8acd3a415030
          © 2007 The Author.
          History

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