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      Augmented Intelligence for Clinical Discovery in Hypertensive Disorders of Pregnancy Using Outlier Analysis

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          Abstract

          Objectives

          Clinical discoveries are heralded by observing unique and unusual clinical cases. The effort of identifying such cases rests on the shoulders of busy clinicians. We assess the feasibility and applicability of an augmented intelligence framework to accelerate the rate of clinical discovery in preeclampsia and hypertensive disorders of pregnancy-an area that has seen little change in its clinical management.

          Methods

          We conducted a retrospective exploratory outlier analysis of participants enrolled in the folic acid clinical trial (FACT, N=2,301) and the Ottawa and Kingston birth cohort (OaK, N=8,085). We applied two outlier analysis methods: extreme misclassification contextual outlier and isolation forest point outlier. The extreme misclassification contextual outlier is based on a random forest predictive model for the outcome of preeclampsia in FACT and hypertensive disorder of pregnancy in OaK. We defined outliers in the extreme misclassification approach as mislabelled observations with a confidence level of more than 90%. Within the isolation forest approach, we defined outliers as observations with an average path length z score less or equal to -3, or more or equal to 3. Content experts reviewed the identified outliers and determined if they represented a potential novelty that could conceivably lead to a clinical discovery.

          Results

          In the FACT study, we identified 19 outliers using the isolation forest algorithm and 13 outliers using the random forest extreme misclassification approach. We determined that three (15.8%) and 10 (76.9%) were potential novelties, respectively. Out of 8,085 participants in the OaK study, we identified 172 outliers using the isolation forest algorithm and 98 outliers using the random forest extreme misclassification approach; four (2.3%) and 32 (32.7%), respectively, were potential novelties. Overall, the outlier analysis part of the augmented intelligence framework identified a total of 302 outliers. These were subsequently reviewed by content experts, representing the human part of the augmented intelligence framework. The clinical review determined that 49 of the 302 outliers represented potential novelties. 

          Conclusions

          Augmented intelligence using extreme misclassification outlier analysis is a feasible and applicable approach for accelerating the rate of clinical discoveries. The use of an extreme misclassification contextual outlier analysis approach has resulted in a higher proportion of potential novelties than using the more traditional point outlier isolation forest approach. This finding was consistent in both the clinical trial and real-world cohort study data. Using augmented intelligence through outlier analysis has the potential to speed up the process of identifying potential clinical discoveries. This approach can be replicated across clinical disciplines and could exist within electronic medical records systems to automatically identify outliers within clinical notes to clinical experts.

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          Most cited references47

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          Random Forests

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            Array programming with NumPy

            Array programming provides a powerful, compact and expressive syntax for accessing, manipulating and operating on data in vectors, matrices and higher-dimensional arrays. NumPy is the primary array programming library for the Python language. It has an essential role in research analysis pipelines in fields as diverse as physics, chemistry, astronomy, geoscience, biology, psychology, materials science, engineering, finance and economics. For example, in astronomy, NumPy was an important part of the software stack used in the discovery of gravitational waves 1 and in the first imaging of a black hole 2 . Here we review how a few fundamental array concepts lead to a simple and powerful programming paradigm for organizing, exploring and analysing scientific data. NumPy is the foundation upon which the scientific Python ecosystem is constructed. It is so pervasive that several projects, targeting audiences with specialized needs, have developed their own NumPy-like interfaces and array objects. Owing to its central position in the ecosystem, NumPy increasingly acts as an interoperability layer between such array computation libraries and, together with its application programming interface (API), provides a flexible framework to support the next decade of scientific and industrial analysis.
              • Record: found
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              The NumPy Array: A Structure for Efficient Numerical Computation

                Author and article information

                Journal
                Cureus
                Cureus
                2168-8184
                Cureus
                Cureus (Palo Alto (CA) )
                2168-8184
                30 March 2023
                March 2023
                : 15
                : 3
                : e36909
                Affiliations
                [1 ] Epidemiology and Public Health, University of Ottawa, Ottawa, CAN
                [2 ] Clinical Epidemiology, Ottawa Hospital Research Institute, Ottawa, CAN
                [3 ] Maternal and Neonatal Research, Children's Hospital of Eastern Ontario, Ottawa, CAN
                [4 ] Medicine, Health Policy Management and Evaluation, and Obstetrics and Gynecology, Saint Michael's Hospital, Toronto, CAN
                [5 ] Health Sciences, University of Ottawa, Ottawa, CAN
                [6 ] Medical Research, International Business Machines (IBM) Corporation, Ottawa, CAN
                [7 ] Research, Canadian Institute of Health Research, Ottawa, CAN
                [8 ] Medicine, McGill University, Montreal, CAN
                [9 ] Obstetrics and Gynecology, Kingston General Hospital, Kingston, CAN
                [10 ] Biomedical and Molecular Sciences, Queen’s University, Kingston, CAN
                [11 ] Maternal and Nenonatal Research, University of Ottawa, Ottawa, CAN
                [12 ] Obstetrics and Gynecology, University of Ottawa, Ottawa, CAN
                [13 ] Obstetrics, Gynecology, and Newborn Care, The Ottawa Hospital, Ottawa, CAN
                [14 ] Maternal and Nenonatal Research, Children’s Hospital of Eastern Ontario, Ottawa, CAN
                Author notes
                Article
                10.7759/cureus.36909
                10065308
                37009347
                98bb2100-ac5c-4f9b-b2fa-ad22621e18d3
                Copyright © 2023, Janoudi et al.

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 27 March 2023
                Categories
                Obstetrics/Gynecology
                Healthcare Technology
                Epidemiology/Public Health

                real-world data,clinical trials,research methods and design,augmented intelligence,hdp,preeclampsia treatment,clinical discovery,hypertensive disorders of pregnancy,preeclampsia-eclampsia

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