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      The complete mitochondrial genome of Sorex minutissimus (Eulipotyphla: Soricidae)

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          Abstract

          In this study, the complete mitochondrial genome of Sorex minutissimus was sequenced and deposited to GeneBank for the first time using muscle tissue. This mitochondrial genome is a circular molecule of 16,700 bp in length and sequence analysis showed it contains 2 rRNA genes, 22 tRNA genes, 13 protein-coding genes, rep_origin, and D_loop. Phylogenetic analysis on the basis of 12 protein-coding genes except ND6 of 13 Soricidae species’ mitochondrial genomes using ML and BI demonstrated that S. minutissimus and other Sorex species were clustered into same clade.

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          MrBayes 3: Bayesian phylogenetic inference under mixed models.

          MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models. This allows the user to analyze heterogeneous data sets consisting of different data types-e.g. morphological, nucleotide, and protein-and to explore a wide variety of structured models mixing partition-unique and shared parameters. The program employs MPI to parallelize Metropolis coupling on Macintosh or UNIX clusters.
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            The complete mitochondrial genome of the Sorex araneus.

            The Sorex araneus (common shrew), a member of the Soricidae family, is the most common shrew throughout Northern Europe. The region includes Great Britain, but excludes Ireland. Herein, we first publish the complete mitochondrial genome of S. araneus. The mitogenome is 16 887 bp in length, which contains 24 tRNA genes, 13 protein-coding genes, 2 rRNA genes and a control region. The overall GC content is 38.28%, which is lower than AT. To verify the accuracy and utility of new determined mitogenome sequences, a species phylogenetic tree is constructed based on the complete mitogenomes of the species and other 10 close species. The current data provide important resources for the research of S. araneus mitochondrial evolution and the species identification.
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              Sequencing and analysis of the complete mitochondrial genome of the masked shrew (Sorex caecutiens) from China

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                Author and article information

                Journal
                Mitochondrial DNA B Resour
                Mitochondrial DNA B Resour
                TMDN
                tmdn20
                Mitochondrial DNA. Part B, Resources
                Taylor & Francis
                2380-2359
                2020
                20 May 2020
                : 5
                : 3
                : 2117-2118
                Affiliations
                [a ]Hulunbuir Academy of Inland Lakes in Northern Cold & Arid Areas , Hulunbuir, P. R. China;
                [b ]College of Life Science, Qufu Normal University , Qufu, P. R. China
                Author notes
                [*]

                These authors contributed equally to this work.

                CONTACT Huashan Dou douhuashan@ 123456163.com Hulunbuir Academy of Inland Lakes in Northern Cold & Arid Areas , Hulunbuir, P. R. China;
                Honghai Zhang zhanghonghai67@ 123456126.com College of Life Science, QuFu Normal University , 57 Jingxuan West Road, QuFu 273165, P. R. China
                Article
                1618207
                10.1080/23802359.2019.1618207
                7510471
                9933307c-c648-4845-b27b-34e68f1a5af1
                © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                Page count
                Figures: 1, Tables: 0, Pages: 2, Words: 994
                Product
                Funding
                Funded by: Special Fund for Forest Scientific Research in the Public Welfare
                Award ID: 201404420
                Funded by: National Natural Science Fund of China
                Award ID: 31872242
                Award ID: 31672313
                Award ID: 31372220
                This work was supported by the Special Fund for Forest Scientific Research in the Public Welfare [201404420] and the National Natural Science Fund of China [31872242, 31672313, 31372220].
                Categories
                Mitogenome Announcement

                sorex minutissimus,mitochondrial genome,phylogenetic tree

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