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      The circadian clock protein REVERBα inhibits pulmonary fibrosis development

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          Significance

          The circadian clock plays an essential role in energy metabolism and inflammation. In contrast, the importance of the clock in the pathogenesis of fibrosis remains poorly explored. This study describes a striking alteration in circadian biology during pulmonary fibrosis where the relatively arrhythmic alveolar structures gain circadian but asynchronous rhythmicity due to infiltration by fibroblasts. Disruption of the clock in these cells, which are not widely implicated in circadian pathophysiology, results in a profibrotic phenotype. Translation of these findings in humans revealed previously unrecognized important circadian risk factors for pulmonary fibrosis (sleep length, chronotype, and shift work). In addition, targeting REVERBα repressed collagen secretion from human fibrotic lung tissue, making this protein a promising therapeutic target.

          Abstract

          Pulmonary inflammatory responses lie under circadian control; however, the importance of circadian mechanisms in the underlying fibrotic phenotype is not understood. Here, we identify a striking change to these mechanisms resulting in a gain of amplitude and lack of synchrony within pulmonary fibrotic tissue. These changes result from an infiltration of mesenchymal cells, an important cell type in the pathogenesis of pulmonary fibrosis. Mutation of the core clock protein REVERBα in these cells exacerbated the development of bleomycin-induced fibrosis, whereas mutation of REVERBα in club or myeloid cells had no effect on the bleomycin phenotype. Knockdown of REVERBα revealed regulation of the little-understood transcription factor TBPL1. Both REVERBα and TBPL1 altered integrinβ1 focal-adhesion formation, resulting in increased myofibroblast activation. The translational importance of our findings was established through analysis of 2 human cohorts. In the UK Biobank, circadian strain markers (sleep length, chronotype, and shift work) are associated with pulmonary fibrosis, making them risk factors. In a separate cohort, REVERBα expression was increased in human idiopathic pulmonary fibrosis (IPF) lung tissue. Pharmacological targeting of REVERBα inhibited myofibroblast activation in IPF fibroblasts and collagen secretion in organotypic cultures from IPF patients, thus suggesting that targeting of REVERBα could be a viable therapeutic approach.

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          Most cited references57

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          NCBI GEO: archive for functional genomics data sets—update

          The Gene Expression Omnibus (GEO, http://www.ncbi.nlm.nih.gov/geo/) is an international public repository for high-throughput microarray and next-generation sequence functional genomic data sets submitted by the research community. The resource supports archiving of raw data, processed data and metadata which are indexed, cross-linked and searchable. All data are freely available for download in a variety of formats. GEO also provides several web-based tools and strategies to assist users to query, analyse and visualize data. This article reports current status and recent database developments, including the release of GEO2R, an R-based web application that helps users analyse GEO data.
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            An Official ATS/ERS/JRS/ALAT Statement: Idiopathic Pulmonary Fibrosis: Evidence-based Guidelines for Diagnosis and Management

            American Journal of Respiratory and Critical Care Medicine, 183(6), 788-824
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              Idiopathic pulmonary fibrosis.

              Idiopathic pulmonary fibrosis is a prototype of chronic, progressive, and fibrotic lung disease. Healthy tissue is replaced by altered extracellular matrix and alveolar architecture is destroyed, which leads to decreased lung compliance, disrupted gas exchange, and ultimately respiratory failure and death. In less than a decade, understanding of the pathogenesis and management of this disease has been transformed, and two disease-modifying therapies have been approved, worldwide. In this Seminar, we summarise the presentation, pathophysiology, diagnosis, and treatment options available for patients with idiopathic pulmonary fibrosis. This disease has improved understanding of the mechanisms of lung fibrosis, and offers hope that similar approaches will transform the management of patients with other progressive fibrotic lung diseases.
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                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc. Natl. Acad. Sci. U.S.A
                pnas
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                14 January 2020
                26 December 2019
                26 December 2019
                : 117
                : 2
                : 1139-1147
                Affiliations
                [1] aFaculty of Biology, Medicine and Health, The University of Manchester , Manchester M13 9PL, United Kingdom;
                [2] bThe George Alleyne Chronic Disease Research Centre, The University of the West Indies , Bridgetown. Barbados BB11000;
                [3] cFibrosis Research Group, Biosciences Institute, Newcastle University , Newcastle upon Tyne NE2 4HH, United Kingdom;
                [4] dManchester University National Health Service Foundation Trust, Manchester Academic Health Science Centre , Manchester M13 9WL, United Kingdom;
                [5] eLaboratory of Tissue Repair and Regeneration, Faculty of Dentistry, University of Toronto , Toronto, ON M5G 1G6, Canada;
                [6] fCentre for Inflammation and Tissue Repair, Faculty of Medical Sciences, University College London , London WC1E 6JJ, United Kingdom;
                [7] gCentre for Inflammation Research, University of Edinburgh , EH16 4TJ Edinburgh, United Kingdom;
                [8] hInstitute of Transplantation, Freeman Hospital, The Newcastle upon Tyne Hospitals National Health Service Foundation Trust , Newcastle upon Tyne NE7 7DN, United Kingdom;
                [9] iTranslational and Clinical Research Institute, Newcastle University , Newcastle upon Tyne NE2 4HH, United Kingdom;
                [10] jNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital , Oxford OX3 9DU, United Kingdom;
                [11] kOxford Centre for Diabetes, Endocrinology and Metabolism, University of Oxford , Oxford OX3 7LE, United Kingdom
                Author notes
                2To whom correspondence may be addressed. Email: john.blaikley@ 123456manchester.ac.uk .

                Edited by Joseph S. Takahashi, The University of Texas Southwestern Medical Center, Dallas, TX, and approved November 22, 2019 (received for review July 16, 2019)

                Author contributions: P.S.C., P.M., A.N., M.L., K.P.-H., A.J.F., R.C.C., B.H., D.W.R., and J.F.B. designed research; P.S.C., P.M., A.N., S.G.A., L.A.B., J.B., G.B.K., N.B., P.F.M., H.J.D., D.A.B., J.E.G., A.S.L., and J.F.B. performed research; M.L., R.V.V., R.S., and N.C.H. contributed new reagents/analytic tools; P.S.C., P.M., A.N., S.G.A., L.A.B., P.F.M., M.K.R., and J.F.B. analyzed data; and P.S.C., P.M., A.N., S.G.A., N.C.H., K.P.-H., A.J.F., R.C.C., D.A.B., J.E.G., A.S.L., M.K.R., B.H., D.W.R., and J.F.B. wrote the paper.

                1P.S.C. and P.M. contributed equally to this work.

                Author information
                http://orcid.org/0000-0001-5070-3183
                http://orcid.org/0000-0002-4739-6773
                http://orcid.org/0000-0001-7651-5682
                Article
                201912109
                10.1073/pnas.1912109117
                6969503
                31879343
                a73dbda0-69a1-41ff-a93b-6647c570eef9
                Copyright © 2020 the Author(s). Published by PNAS.

                This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY).

                History
                Page count
                Pages: 9
                Funding
                Funded by: RCUK | Medical Research Council (MRC) 501100000265
                Award ID: MR/L006499/1
                Award Recipient : Lee Anthony Borthwick Award Recipient : Gareth B Kitchen Award Recipient : David A Bechtold Award Recipient : Julie E Gibbs Award Recipient : Andrew S. Loudon Award Recipient : David W Ray Award Recipient : John F Blaikley
                Funded by: Wellcome 100010269
                Award ID: 107851/Z/15/Z
                Award Recipient : Neil C Henderson Award Recipient : Andrew S. Loudon Award Recipient : David W Ray
                Funded by: RCUK | Medical Research Council (MRC) 501100000265
                Award ID: MR/P023576/1
                Award Recipient : Lee Anthony Borthwick Award Recipient : Gareth B Kitchen Award Recipient : David A Bechtold Award Recipient : Julie E Gibbs Award Recipient : Andrew S. Loudon Award Recipient : David W Ray Award Recipient : John F Blaikley
                Funded by: Arthritis Research UK 501100000341
                Award ID: 20629
                Award Recipient : Julie E Gibbs
                Funded by: Asthma UK 501100000362
                Award ID: AUK-SCAD-2013-229
                Award Recipient : Hannah J. Durrington
                Funded by: RCUK | Medical Research Council (MRC) 501100000265
                Award ID: MR/N002024/1
                Award Recipient : Lee Anthony Borthwick Award Recipient : Gareth B Kitchen Award Recipient : David A Bechtold Award Recipient : Julie E Gibbs Award Recipient : Andrew S. Loudon Award Recipient : David W Ray Award Recipient : John F Blaikley
                Funded by: Gouvernement du Canada | Canadian Institutes of Health Research (CIHR) 501100000024
                Award ID: #375597
                Award Recipient : Boris Hinz
                Funded by: Wellcome 100010269
                Award ID: 103749
                Award Recipient : Neil C Henderson Award Recipient : Andrew S. Loudon Award Recipient : David W Ray
                Funded by: RCUK | Medical Research Council (MRC) 501100000265
                Award ID: MR/R023026/1
                Award Recipient : Lee Anthony Borthwick Award Recipient : Gareth B Kitchen Award Recipient : David A Bechtold Award Recipient : Julie E Gibbs Award Recipient : Andrew S. Loudon Award Recipient : David W Ray Award Recipient : John F Blaikley
                Funded by: National Institute for Academic Anaesthesia (NIAA) 501100000349
                Award ID: WKR0-2019-0037
                Award Recipient : Gareth B Kitchen Award Recipient : John F Blaikley
                Categories
                Biological Sciences
                Medical Sciences

                pulmonary fibrosis,circadian,reverb alpha,sleep,integrin
                pulmonary fibrosis, circadian, reverb alpha, sleep, integrin

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