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      Evidence for anaphase pulling forces during C. elegans meiosis

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          Abstract

          Meiotic anaphase has been reported to be mediated by kinetochore-independent pushing forces in C. elegans. Danlasky et al. find that depletion of kinetochore proteins reduces pulling forces and prevents successful separation of homologous chromosomes during C. elegans meiosis.

          Abstract

          Anaphase chromosome movement is thought to be mediated by pulling forces generated by end-on attachment of microtubules to the outer face of kinetochores. However, it has been suggested that during C. elegans female meiosis, anaphase is mediated by a kinetochore-independent pushing mechanism with microtubules only attached to the inner face of segregating chromosomes. We found that the kinetochore proteins KNL-1 and KNL-3 are required for preanaphase chromosome stretching, suggesting a role in pulling forces. In the absence of KNL-1,3, pairs of homologous chromosomes did not separate and did not move toward a spindle pole. Instead, each homolog pair moved together with the same spindle pole during anaphase B spindle elongation. Two masses of chromatin thus ended up at opposite spindle poles, giving the appearance of successful anaphase.

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          The conserved KMN network constitutes the core microtubule-binding site of the kinetochore.

          The microtubule-binding interface of the kinetochore is of central importance in chromosome segregation. Although kinetochore components that stabilize, translocate on, and affect the polymerization state of microtubules have been identified, none have proven essential for kinetochore-microtubule interactions. Here, we examined the conserved KNL-1/Mis12 complex/Ndc80 complex (KMN) network, which is essential for kinetochore-microtubule interactions in vivo. We identified two distinct microtubule-binding activities within the KMN network: one associated with the Ndc80/Nuf2 subunits of the Ndc80 complex, and a second in KNL-1. Formation of the complete KMN network, which additionally requires the Mis12 complex and the Spc24/Spc25 subunits of the Ndc80 complex, synergistically enhances microtubule-binding activity. Phosphorylation by Aurora B, which corrects improper kinetochore-microtubule connections in vivo, reduces the affinity of the Ndc80 complex for microtubules in vitro. Based on these findings, we propose that the conserved KMN network constitutes the core microtubule-binding site of the kinetochore.
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            Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.

            A principal challenge currently facing biologists is how to connect the complete DNA sequence of an organism to its development and behaviour. Large-scale targeted-deletions have been successful in defining gene functions in the single-celled yeast Saccharomyces cerevisiae, but comparable analyses have yet to be performed in an animal. Here we describe the use of RNA interference to inhibit the function of approximately 86% of the 19,427 predicted genes of C. elegans. We identified mutant phenotypes for 1,722 genes, about two-thirds of which were not previously associated with a phenotype. We find that genes of similar functions are clustered in distinct, multi-megabase regions of individual chromosomes; genes in these regions tend to share transcriptional profiles. Our resulting data set and reusable RNAi library of 16,757 bacterial clones will facilitate systematic analyses of the connections among gene sequence, chromosomal location and gene function in C. elegans.
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              The auxin-inducible degradation (AID) system enables versatile conditional protein depletion in C. elegans

              Experimental manipulation of protein abundance in living cells or organisms is an essential strategy for investigation of biological regulatory mechanisms. Whereas powerful techniques for protein expression have been developed in Caenorhabditis elegans, existing tools for conditional disruption of protein function are far more limited. To address this, we have adapted the auxin-inducible degradation (AID) system discovered in plants to enable conditional protein depletion in C. elegans. We report that expression of a modified Arabidopsis TIR1 F-box protein mediates robust auxin-dependent depletion of degron-tagged targets. We document the effectiveness of this system for depletion of nuclear and cytoplasmic proteins in diverse somatic and germline tissues throughout development. Target proteins were depleted in as little as 20-30 min, and their expression could be re-established upon auxin removal. We have engineered strains expressing TIR1 under the control of various promoter and 3′ UTR sequences to drive tissue-specific or temporally regulated expression. The degron tag can be efficiently introduced by CRISPR/Cas9-based genome editing. We have harnessed this system to explore the roles of dynamically expressed nuclear hormone receptors in molting, and to analyze meiosis-specific roles for proteins required for germ line proliferation. Together, our results demonstrate that the AID system provides a powerful new tool for spatiotemporal regulation and analysis of protein function in a metazoan model organism.
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                Author and article information

                Journal
                J Cell Biol
                J Cell Biol
                jcb
                The Journal of Cell Biology
                Rockefeller University Press
                0021-9525
                1540-8140
                07 December 2020
                16 October 2020
                : 219
                : 12
                : e202005179
                Affiliations
                [1]Department of Molecular and Cellular Biology, University of California, Davis, Davis, CA
                Author notes
                Correspondence to Francis J. McNally: fjmcnally@ 123456ucdavis.edu
                [*]

                M.T. Panzica and K.P. McNally contributed equally to this paper.

                Author information
                https://orcid.org/0000-0002-1900-981X
                https://orcid.org/0000-0001-8797-8965
                https://orcid.org/0000-0002-7185-2900
                https://orcid.org/0000-0003-2106-3062
                Article
                jcb.202005179
                10.1083/jcb.202005179
                7577052
                33064834
                a77addfa-1bd8-40b7-b791-f1917f71e322
                © 2020 Danlasky et al.

                This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.rupress.org/terms/). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 4.0 International license, as described at https://creativecommons.org/licenses/by-nc-sa/4.0/).

                History
                : 24 May 2020
                : 20 July 2020
                : 16 September 2020
                Page count
                Pages: 18
                Funding
                Funded by: National Institutes of Health, DOI http://dx.doi.org/10.13039/100000002;
                Funded by: Office of Research Infrastructure Programs;
                Award ID: P40 OD010440
                Funded by: National Institute of General Medical Sciences, DOI http://dx.doi.org/10.13039/100000057;
                Award ID: 1R01GM079421
                Award ID: 1R35GM124889
                Funded by: U.S. Department of Agriculture, DOI http://dx.doi.org/10.13039/100000199;
                Funded by: National Institute of Food and Agriculture, DOI http://dx.doi.org/10.13039/100005825;
                Award ID: 1009162
                Categories
                Article
                Genetics
                Cell Cycle and Division

                Cell biology
                Cell biology

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