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      Stabilization of p18 by deubiquitylase CYLD is pivotal for cell cycle progression and viral replication

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          Abstract

          p18 is a key negative regulator of cell cycle progression and mediates cell cycle arrest at the G1/S phase. Ubiquitination is the prime mechanism in regulating p18 protein abundance. However, so far no post- translational regulator, especially DUBs, has been identified to regulate the protein stability of p18. In this paper, we identified CYLD as a deubiquitinase of p18, which binds to and removes the K48-linked polyubiquitylation chains conjugated onto p18, thus stabilizing the p18 protein. Loss of CYLD causes the degradation of p18 and induces the G1/S transition. Epstein–Barr virus (EBV), is the human oncovirus etiologically linked to nasopharyngeal carcinoma (NPC). Here we found that EBV drives a replication passive environment by deregulating the CYLD-p18 axis. Functionally, CYLD inhibits cell proliferation and tumorigenesis through p18 in vivo. Restoring CYLD prevents EBV induced viral replication and tumor growth. Collectively, our results identify CYLD directly stabilizes p18 to regulate the cellular G1/S transition. The reconstitution of CYLD-p18 axis could be a promising approach for EBV-positive cancer therapy.

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          Defining the human deubiquitinating enzyme interaction landscape.

          Deubiquitinating enzymes (Dubs) function to remove covalently attached ubiquitin from proteins, thereby controlling substrate activity and/or abundance. For most Dubs, their functions, targets, and regulation are poorly understood. To systematically investigate Dub function, we initiated a global proteomic analysis of Dubs and their associated protein complexes. This was accomplished through the development of a software platform called CompPASS, which uses unbiased metrics to assign confidence measurements to interactions from parallel nonreciprocal proteomic data sets. We identified 774 candidate interacting proteins associated with 75 Dubs. Using Gene Ontology, interactome topology classification, subcellular localization, and functional studies, we link Dubs to diverse processes, including protein turnover, transcription, RNA processing, DNA damage, and endoplasmic reticulum-associated degradation. This work provides the first glimpse into the Dub interaction landscape, places previously unstudied Dubs within putative biological pathways, and identifies previously unknown interactions and protein complexes involved in this increasingly important arm of the ubiquitin-proteasome pathway.
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            Epstein-Barr virus: more than 50 years old and still providing surprises.

            It is more than 50 years since the Epstein-Barr virus (EBV), the first human tumour virus, was discovered. EBV has subsequently been found to be associated with a diverse range of tumours of both lymphoid and epithelial origin. Progress in the molecular analysis of EBV has revealed fundamental mechanisms of more general relevance to the oncogenic process. This Timeline article highlights key milestones in the 50-year history of EBV and discusses how this virus provides a paradigm for exploiting insights at the molecular level in the diagnosis, treatment and prevention of cancer.
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              Direct observation of individual endogenous protein complexes in situ by proximity ligation.

              Cellular processes can only be understood as the dynamic interplay of molecules. There is a need for techniques to monitor interactions of endogenous proteins directly in individual cells and tissues to reveal the cellular and molecular architecture and its responses to perturbations. Here we report our adaptation of the recently developed proximity ligation method to examine the subcellular localization of protein-protein interactions at single-molecule resolution. Proximity probes-oligonucleotides attached to antibodies against the two target proteins-guided the formation of circular DNA strands when bound in close proximity. The DNA circles in turn served as templates for localized rolling-circle amplification (RCA), allowing individual interacting pairs of protein molecules to be visualized and counted in human cell lines and clinical specimens. We used this method to show specific regulation of protein-protein interactions between endogenous Myc and Max oncogenic transcription factors in response to interferon-gamma (IFN-gamma) signaling and low-molecular-weight inhibitors.
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                Author and article information

                Contributors
                ycao98@vip.sina.com
                Journal
                NPJ Precis Oncol
                NPJ Precis Oncol
                NPJ Precision Oncology
                Nature Publishing Group UK (London )
                2397-768X
                2 March 2021
                2 March 2021
                2021
                : 5
                : 14
                Affiliations
                [1 ]GRID grid.216417.7, ISNI 0000 0001 0379 7164, Key Laboratory of Carcinogenesis and Cancer Invasion, Chinese Ministry of Education, Department of Radiology, Xiangya Hospital, , Central South University, ; Changsha, China
                [2 ]GRID grid.216417.7, ISNI 0000 0001 0379 7164, Cancer Research Institute and School of Basic Medical Science, Xiangya School of Medicine, , Central South University, ; Changsha, China
                [3 ]Key Laboratory of Carcinogenesis, Chinese Ministry of Health, Changsha, China
                [4 ]GRID grid.67293.39, Molecular Science and Biomedicine Laboratory, State Key Laboratory of Chemo/ Biosensing and Chemometrics, College of Biology, , Hunan University, ; Changsha, China
                [5 ]GRID grid.263761.7, ISNI 0000 0001 0198 0694, Institutes of Biology and Medical Sciences, , Soochow University, ; Suzhou, China
                [6 ]GRID grid.17635.36, ISNI 0000000419368657, The Hormel Institute, , University of Minnesota, ; Austin, MN USA
                [7 ]GRID grid.8547.e, ISNI 0000 0001 0125 2443, Key Laboratory for Carcinogenesis and Cancer Invasion, Chinese Ministry of Education, Zhongshan Hospital, Shanghai Medical School, , Fudan University, ; Shanghai, China
                [8 ]GRID grid.216417.7, ISNI 0000 0001 0379 7164, Department of Otolaryngology Head and Neck Surgery, Xiangya Hospital, , Central South University, ; Changsha, China
                [9 ]GRID grid.216417.7, ISNI 0000 0001 0379 7164, Department of Radiology, Xiangya Hospital, , Central South University, ; Changsha, China
                [10 ]GRID grid.216417.7, ISNI 0000 0001 0379 7164, Molecular Imaging Research Center of Central South University, ; Changsha, Hunan China
                [11 ]Research Center for Technologies of Nucleic Acid-Based Diagnostics and Therapeutics Hunan Province, Changsha, China
                [12 ]National Joint Engineering Research Center for Genetic Diagnostics of Infectious Diseases and Cancer, Changsha, China
                Author information
                http://orcid.org/0000-0002-1680-915X
                http://orcid.org/0000-0002-3558-3336
                Article
                153
                10.1038/s41698-021-00153-8
                7925679
                33654169
                aa43f4b3-f349-4419-a47d-93ffc68bd00c
                © The Author(s) 2021

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 1 July 2020
                : 13 January 2021
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100001809, National Natural Science Foundation of China (National Science Foundation of China);
                Award ID: 81874172
                Award ID: 81430064
                Award ID: 81602402
                Award Recipient :
                Categories
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                © The Author(s) 2021

                head and neck cancer,ubiquitylation,oncogenesis
                head and neck cancer, ubiquitylation, oncogenesis

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