54
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Robust automatic segmentation of corneal layer boundaries in SDOCT images using graph theory and dynamic programming

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Segmentation of anatomical structures in corneal images is crucial for the diagnosis and study of anterior segment diseases. However, manual segmentation is a time-consuming and subjective process. This paper presents an automatic approach for segmenting corneal layer boundaries in Spectral Domain Optical Coherence Tomography images using graph theory and dynamic programming. Our approach is robust to the low-SNR and different artifact types that can appear in clinical corneal images. We show that our method segments three corneal layer boundaries in normal adult eyes more accurately compared to an expert grader than a second grader—even in the presence of significant imaging outliers.

          Related collections

          Most cited references24

          • Record: found
          • Abstract: found
          • Article: not found

          Optical coherence tomography.

          A technique called optical coherence tomography (OCT) has been developed for noninvasive cross-sectional imaging in biological systems. OCT uses low-coherence interferometry to produce a two-dimensional image of optical scattering from internal tissue microstructures in a way that is analogous to ultrasonic pulse-echo imaging. OCT has longitudinal and lateral spatial resolutions of a few micrometers and can detect reflected signals as small as approximately 10(-10) of the incident optical power. Tomographic imaging is demonstrated in vitro in the peripapillary area of the retina and in the coronary artery, two clinically relevant examples that are representative of transparent and turbid media, respectively.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: found
            Is Open Access

            Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation

            Segmentation of anatomical and pathological structures in ophthalmic images is crucial for the diagnosis and study of ocular diseases. However, manual segmentation is often a time-consuming and subjective process. This paper presents an automatic approach for segmenting retinal layers in Spectral Domain Optical Coherence Tomography images using graph theory and dynamic programming. Results show that this method accurately segments eight retinal layer boundaries in normal adult eyes more closely to an expert grader as compared to a second expert grader.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Automated 3-D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images.

              With the introduction of spectral-domain optical coherence tomography (OCT), much larger image datasets are routinely acquired compared to what was possible using the previous generation of time-domain OCT. Thus, the need for 3-D segmentation methods for processing such data is becoming increasingly important. We report a graph-theoretic segmentation method for the simultaneous segmentation of multiple 3-D surfaces that is guaranteed to be optimal with respect to the cost function and that is directly applicable to the segmentation of 3-D spectral OCT image data. We present two extensions to the general layered graph segmentation method: the ability to incorporate varying feasibility constraints and the ability to incorporate true regional information. Appropriate feasibility constraints and cost functions were learned from a training set of 13 spectral-domain OCT images from 13 subjects. After training, our approach was tested on a test set of 28 images from 14 subjects. An overall mean unsigned border positioning error of 5.69+/-2.41 microm was achieved when segmenting seven surfaces (six layers) and using the average of the manual tracings of two ophthalmologists as the reference standard. This result is very comparable to the measured interobserver variability of 5.71+/-1.98 microm.
                Bookmark

                Author and article information

                Journal
                Biomed Opt Express
                BOE
                Biomedical Optics Express
                Optical Society of America
                2156-7085
                12 May 2011
                01 June 2011
                12 May 2011
                : 2
                : 6
                : 1524-1538
                Affiliations
                [1 ]Department of Biomedical Engineering, Duke University, Durham, NC 27708, US
                [2 ]Department of Ophthalmology, Duke University Medical Center, Durham, NC 27710, USA
                Author notes
                Article
                143850
                10.1364/BOE.2.001524
                3114221
                21698016
                ac2e23cf-81cf-40b4-bd9c-2dde86ec1092
                ©2011 Optical Society of America

                This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially.

                History
                : 8 March 2011
                : 6 May 2011
                : 10 May 2011
                Funding
                Funded by: Duke Pratt Fellowship Program
                Funded by: Duke Grand Challenge Scholars Program
                Funded by: NIH
                Award ID: K12-EY01633305
                Award ID: R21-EY020001
                Funded by: Research to Prevent Blindness
                Funded by: Wallace H. Coulter Translational Partners Grant Program
                Categories
                Image Processing
                Custom metadata
                True
                0

                Vision sciences
                (110.4500) optical coherence tomography,(100.0100) image processing,(170.4470) ophthalmology,(100.2960) image analysis

                Comments

                Comment on this article