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      ER bodies in plants of the Brassicales order: biogenesis and association with innate immunity

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          Abstract

          The endoplasmic reticulum (ER) forms highly organized network structures composed of tubules and cisternae. Many plant species develop additional ER-derived structures, most of which are specific for certain groups of species. In particular, a rod-shaped structure designated as the ER body is produced by plants of the Brassicales order, which includes Arabidopsis thaliana. Genetic analyses and characterization of A. thaliana mutants possessing a disorganized ER morphology or lacking ER bodies have provided insights into the highly organized mechanisms responsible for the formation of these unique ER structures. The accumulation of proteins specific for the ER body within the ER plays an important role in the formation of ER bodies. However, a mutant that exhibits morphological defects of both the ER and ER bodies has not been identified. This suggests that plants in the Brassicales order have evolved novel mechanisms for the development of this unique organelle, which are distinct from those used to maintain generic ER structures. In A. thaliana, ER bodies are ubiquitous in seedlings and roots, but rare in rosette leaves. Wounding of rosette leaves induces de novo formation of ER bodies, suggesting that these structures are associated with resistance against pathogens and/or herbivores. ER bodies accumulate a large amount of β-glucosidases, which can produce substances that potentially protect against invading pests. Biochemical studies have determined that the enzymatic activities of these β-glucosidases are enhanced during cell collapse. These results suggest that ER bodies are involved in plant immunity, although there is no direct evidence of this. In this review, we provide recent perspectives of ER and ER body formation in A. thaliana, and discuss clues for the functions of ER bodies. We highlight defense strategies against biotic stress that are unique for the Brassicales order, and discuss how ER structures could contribute to these strategies.

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          Most cited references102

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          The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

          Papaya, a fruit crop cultivated in tropical and subtropical regions, is known for its nutritional benefits and medicinal applications. Here we report a 3x draft genome sequence of 'SunUp' papaya, the first commercial virus-resistant transgenic fruit tree to be sequenced. The papaya genome is three times the size of the Arabidopsis genome, but contains fewer genes, including significantly fewer disease-resistance gene analogues. Comparison of the five sequenced genomes suggests a minimal angiosperm gene set of 13,311. A lack of recent genome duplication, atypical of other angiosperm genomes sequenced so far, may account for the smaller papaya gene number in most functional groups. Nonetheless, striking amplifications in gene number within particular functional groups suggest roles in the evolution of tree-like habit, deposition and remobilization of starch reserves, attraction of seed dispersal agents, and adaptation to tropical daylengths. Transgenesis at three locations is closely associated with chloroplast insertions into the nuclear genome, and with topoisomerase I recognition sites. Papaya offers numerous advantages as a system for fruit-tree functional genomics, and this draft genome sequence provides the foundation for revealing the basis of Carica's distinguishing morpho-physiological, medicinal and nutritional properties.
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            A glucosinolate metabolism pathway in living plant cells mediates broad-spectrum antifungal defense.

            Selection pressure exerted by insects and microorganisms shapes the diversity of plant secondary metabolites. We identified a metabolic pathway for glucosinolates, known insect deterrents, that differs from the pathway activated by chewing insects. This pathway is active in living plant cells, may contribute to glucosinolate turnover, and has been recruited for broad-spectrum antifungal defense responses. The Arabidopsis CYP81F2 gene encodes a P450 monooxygenase that is essential for the pathogen-induced accumulation of 4-methoxyindol-3-ylmethylglucosinolate, which in turn is activated by the atypical PEN2 myrosinase (a type of beta-thioglucoside glucohydrolase) for antifungal defense. We propose that reiterated enzymatic cycles, controlling the generation of toxic molecules and their detoxification, enable the recruitment of glucosinolates in defense responses.
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              Plant pathogenesis-related (PR) proteins: a focus on PR peptides.

              The novel classes of plant pathogenesis-related (PR) proteins identified during the last decade also include novel peptide families. This review specifically focuses on these pathogenesis-related peptides, including proteinase inhibitors (PR-6 family), plant defensins (PR-12 family), thionins (PR-13 family) and lipid transfer proteins (PR-14 family). For each family of PR peptides, the general features concerning occurrence, expression and possible functions of their members are described. Next, more specifically the occurrence of each PR peptide family in the model plant Arabidopsis thaliana is discussed. Single-gene studies performed on particular gene members of a PR peptide family are reported. In addition, expression data of yet undescribed gene members of that particular PR peptide family are presented by consultation of publicly available micro-array databases. Finally an update is provided on the potential role of these PR peptides in A. thaliana, with a focus on their possible involvement in plant defense.
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                Author and article information

                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                10 March 2014
                2014
                : 5
                : 73
                Affiliations
                [1] 1Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research Cologne, Germany
                [2] 2Department of Cell Biology, National Institute for Basic Biology Okazaki, Japan
                [3] 3Department of Basic Biology, School of Life Science, The Graduate University for Advanced Studies (Sokendai) Okazaki, Japan
                [4] 4Institute of Bioorganic Chemistry, Polish Academy of Sciences Poznañ, Poland
                [5] 5Department of Botany, Graduate School of Science, Kyoto University Kyoto, Japan
                Author notes

                Edited by: Federica Brandizzi, Michigan State University, USA

                Reviewed by: Richard Strasser, University of Natural Resources and Life Sciences, Austria; Diane C. Bassham, Iowa State University, USA

                *Correspondence: Ikuko Hara-Nishimura, Laboratory of Plant Molecular and Cell Biology, Department of Botany, Graduate School of Science, Kyoto University, Kita-Shirakawa Oiwake-cho, Sakyo-ku, 606-8502 Kyoto, Japan e-mail: ihnishi@ 123456gr.bot.kyoto-u.ac.jp

                This article was submitted to Plant Cell Biology, a section of the journal Frontiers in Plant Science.

                †These authors have contributed equally to this work.

                Article
                10.3389/fpls.2014.00073
                3947992
                24653729
                b1d83904-3851-4c9d-a492-74cd96f08f86
                Copyright © 2014 Nakano, Yamada, Bednarek, Nishimura and Hara-Nishimura.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 06 January 2014
                : 12 February 2014
                Page count
                Figures: 7, Tables: 1, Equations: 0, References: 123, Pages: 17, Words: 13601
                Categories
                Plant Science
                Review Article

                Plant science & Botany
                endoplasmic reticulum,er body,organelle biogenesis,β-glucosidase,plant defenses,secondary metabolites,glucosinolate

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