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      A phylogeny for African Pipistrellus species with the description of a new species from West Africa (Mammalia: Chiroptera)

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          Abstract

          Pipistrelloid bats are among the most poorly known bats in Africa, a status no doubt exacerbated by their small size, drab brown fur and general similarity in external morphology. The systematic relationships of these bats have been a matter of debate for decades, and despite some recent molecular studies, much confusion remains. Adding to the confusion has been the recent discovery of numerous new species. Using two mitochondrial genes, we present a phylogeny for this group that supports the existence of three main clades in Africa: Pipistrellus, Neoromicia and the recently described Parahypsugo. However, the basal branches of the tree are poorly supported. Using an integrative taxonomic approach, we describe a new species of Pipistrellus sp. nov. from West Africa, which has been cited as Pipistrellus cf. grandidieri in the literature. We demonstrate that it is not closely related to Pipistrellus grandidieri from East Africa, but instead is sister to Pipistrellus hesperidus. Furthermore, the species Pi. grandidieri appears to be embedded in the newly described genus Parahypsugo, and is therefore better placed in that genus than in Pipistrellus. This has important taxonomic implications, because a new subgenus (Afropipistrellus) described for Pi. grandidieri predates Parahypsugo and should therefore be used for the entire “Parahypsugo” clade. The Upper Guinea rainforest zone, and particularly the upland areas in the south-eastern Guinea—northern Liberia border region may represent a global hotspot for pipistrelloid bats and should receive increased conservation focus as a result.

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          Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species.

          With millions of species and their life-stage transformations, the animal kingdom provides a challenging target for taxonomy. Recent work has suggested that a DNA-based identification system, founded on the mitochondrial gene, cytochrome c oxidase subunit 1 (COI), can aid the resolution of this diversity. While past work has validated the ability of COI sequences to diagnose species in certain taxonomic groups, the present study extends these analyses across the animal kingdom. The results indicate that sequence divergences at COI regularly enable the discrimination of closely allied species in all animal phyla except the Cnidaria. This success in species diagnosis reflects both the high rates of sequence change at COI in most animal groups and constraints on intraspecific mitochondrial DNA divergence arising, at least in part, through selective sweeps mediated via interactions with the nuclear genome.
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            Ecology and Host Identity Outweigh Evolutionary History in Shaping the Bat Microbiome

            This study is the first to provide a comprehensive survey of bacterial symbionts from multiple anatomical sites across a broad taxonomic range of Afrotropical bats, demonstrating significant associations between the bat microbiome and anatomical site, geographic locality, and host identity—but not evolutionary history. This study provides a framework for future systems biology approaches to examine host-symbiont relationships across broad taxonomic scales, emphasizing the need to elucidate the interplay between host ecology and evolutionary history in shaping the microbiome of different anatomical sites.
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              Bat Systematics in the Light of Unconstrained Analyses of a Comprehensive Molecular Supermatrix

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                Author and article information

                Contributors
                Journal
                Zoological Journal of the Linnean Society
                Oxford University Press (OUP)
                0024-4082
                1096-3642
                September 04 2020
                September 04 2020
                Affiliations
                [1 ]Department of Biological Sciences, University of Eswatini, Kwaluseni, Eswatini
                [2 ]Mammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Hatfield, Pretoria, South Africa
                [3 ]Durban Natural Science Museum, Durban, South Africa
                [4 ]Zoologisches Forschungsmuseum Alexander Koenig, Leibniz Institute for Animal Biodiversity, Adenauerallee, Bonn, Germany
                [5 ]Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA
                [6 ]E.O. Wilson Biodiversity Laboratory, Gorongosa National Park, Mozambique
                [7 ]Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA
                [8 ]Centre for Viral Zoonoses, Department of Medical Virology, University of Pretoria, Pretoria, South Africa
                [9 ]South African National Biodiversity Institute, Pretoria, South Africa
                Article
                10.1093/zoolinnean/zlaa068
                b3fbcb9a-6268-4b78-a1e2-87125adf28bf
                © 2020

                https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model

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