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      Introduction to Research Topic – Brain Connectivity Analysis: Investigating Brain Disorders. Part 1: The Review Articles

      editorial
      1 , 2
      Frontiers in Systems Neuroscience
      Frontiers Research Foundation

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          Abstract

          In the past few years, advances in human structural and functional neuroimaging, especially with respect to magnetic resonance imaging, have resulted in an explosion of studies exploring the anatomical and functional connectivities between different regions of the brain. More and more studies have employed resting and task-related connectivity analyses to assess functional interactions, and other studies have used diffusion-weighted tractography to examine the organization and integrity of white matter tracts. Many of these studies have addressed normal human function, but recently, a number of investigators have turned their attention to examining brain disorders. We are on the verge of being able to better understand the pathophysiology of neurological and psychiatric disorders and the effect of treatments on brain function. The study of brain disorders is a complex endeavor: not only does it require understanding the normal brain, and the regions involved in a particular function, but also it needs a deeper understanding of brain networks and their dynamics. Moreover, in many cases, disorders are progressive, and thus imaging could potentially become a source of biomarkers for early detection and assessment of the course of a disease (Horwitz and Rowe, 2011), and for evaluating potential treatments. The articles that appear in this special topics ebook represent the current status of the applications that employ brain connectivity analysis to investigate brain disorders. Although certain types of connectivity analyses have become very popular recently [e.g., resting state fMRI functional connectivity – see the special topics issue of Frontiers in Systems Neuroscience edited by Uddin and Menon (2010)], we have chosen to cover articles that represent the broadest possible set of connectivity methods, employing the widest possible spectrum of imaging techniques, and applied to the full range of neurological, psychiatric, and developmental disorders. In this way, we hope that readers acquire an understanding of how these relatively new connectivity analysis methods enable investigators to address brain disorders from a network perspective. Even pathology localized to one area of the brain can lead to dysfunctional network behavior, since no brain region is an island onto itself. The insights offered by the network paradigm have, therefore, important ramifications for using neuroimaging to help detect and diagnose brain disorders, interpret the symptoms of many disorders, and assess potential treatments. Two types of articles comprise this special topics ebook – review articles and papers that include primarily the results of original research. Here, we provide a brief overview of the review articles. See the Horovitz and Horwitz editorial (Introduction to research topic – Brain connectivity analysis: investigating brain disorders. Part 2: original research articles) for a corresponding overview of the research papers. The review articles can be roughly divided into (1) those that focus on a connectivity method, and use one or more disorders to illustrate the method, and (2) those whose emphasis is placed on a particular disorder, and discuss a number of relevant functional and structural connectivity studies investigating the disorder. In the first category of reviews, Rowe (2010) provides an overview of fMRI-based functional and effective connectivity, with a focus on its applications to neurological disorders. One of the most widely used effective connectivity techniques is dynamic causal modeling (DCM; Friston et al., 2003), and Seghier et al. (2010) present an extensive review of its application to all brain disorders. This article also includes a useful introduction to Bayesian model selection (Penny et al., 2004), a key component of DCM. Another “functional” connectivity method that has been applied to investigate brain disorders is transcranial magnetic stimulation (TMS), and the article by Hampson and Hoffman (2010) contains a nice overview of the method, along with a review of its applications to psychiatric and neurological disorders. In TMS, an externally applied changing magnetic field is used to induce electrical stimulation in a cortical brain area which propagates through long-range connections to other brain regions. David et al. (2010) discuss a similar method, direct electrical stimulation (DES), applied using intracranial electrodes in some epileptic patients during presurgical evaluation prior to epileptogenic tissue resection. DES is applied directly to cortical tissue and tracts with extremely well-defined spatial definition, and in this sense, it provides human data that are unattainable by any other method. Epilepsy also provides the basis for two other reviews. Wendling et al. (2010) discuss a variety of functional connectivity techniques that have been applied to electrophysiological data obtained from scalp and intracerebral EEG recordings, whereas the review by Lemieux et al. (2011) offers a broad overview of both EEG-based and fMRI-based functional and effective connectivity analyses. Finally, Alexander-Bloch et al. (2010) provide a useful overview of the basic concepts and mathematics of graph theory as applied to fMRI resting data. As an example of graph theory as applied to resting state fMRI, they present results of a study comparing childhood-onset schizophrenia with normal controls, showing disrupted modularity and local connectivity in the patients. The second category of review articles focuses on disorders. Schipul et al. (2011) provide a detailed review of autism. In many ways autism represents the classic example of a disorder where analyses of imaging data at the single brain region level yielded very little insight, but network analyses have proven quite fruitful in furthering our understanding of the condition. A second brain disorder that is reviewed here is coma (and related disorders of consciousness). Noirhomme et al. (2010) show that such studies can shed important light on what mediates conscious awareness. Two articles address stroke, in particular focusing on using brain connectivity analyses to assess functional recovery. Westlake and Nagarajan (2011) provide an overview of functional connectivity in relation to motor performance. Their review emphasizes PET, fMRI, and EEG/MEG studies. In the other review, Johansen-Berg et al. (2010) examine white matter connectivity results, obtained using diffusion tensor imaging (DTI). Their paper includes information on how this technique can be used to test for dynamic changes in structural connectivity with learning or with recovery from the effects of a stroke.

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          Dynamic causal modelling.

          In this paper we present an approach to the identification of nonlinear input-state-output systems. By using a bilinear approximation to the dynamics of interactions among states, the parameters of the implicit causal model reduce to three sets. These comprise (1) parameters that mediate the influence of extrinsic inputs on the states, (2) parameters that mediate intrinsic coupling among the states, and (3) [bilinear] parameters that allow the inputs to modulate that coupling. Identification proceeds in a Bayesian framework given known, deterministic inputs and the observed responses of the system. We developed this approach for the analysis of effective connectivity using experimentally designed inputs and fMRI responses. In this context, the coupling parameters correspond to effective connectivity and the bilinear parameters reflect the changes in connectivity induced by inputs. The ensuing framework allows one to characterise fMRI experiments, conceptually, as an experimental manipulation of integration among brain regions (by contextual or trial-free inputs, like time or attentional set) that is revealed using evoked responses (to perturbations or trial-bound inputs, like stimuli). As with previous analyses of effective connectivity, the focus is on experimentally induced changes in coupling (cf., psychophysiologic interactions). However, unlike previous approaches in neuroimaging, the causal model ascribes responses to designed deterministic inputs, as opposed to treating inputs as unknown and stochastic.
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            Disrupted Modularity and Local Connectivity of Brain Functional Networks in Childhood-Onset Schizophrenia

            Modularity is a fundamental concept in systems neuroscience, referring to the formation of local cliques or modules of densely intra-connected nodes that are sparsely inter-connected with nodes in other modules. Topological modularity of brain functional networks can quantify theoretically anticipated abnormality of brain network community structure – so-called dysmodularity – in developmental disorders such as childhood-onset schizophrenia (COS). We used graph theory to investigate topology of networks derived from resting-state fMRI data on 13 COS patients and 19 healthy volunteers. We measured functional connectivity between each pair of 100 regional nodes, focusing on wavelet correlation in the frequency interval 0.05–0.1 Hz, then applied global and local thresholding rules to construct graphs from each individual association matrix over the full range of possible connection densities. We show how local thresholding based on the minimum spanning tree facilitates group comparisons of networks by forcing the connectedness of sparse graphs. Threshold-dependent graph theoretical results are compatible with the results of a k-means unsupervised learning algorithm and a multi-resolution (spin glass) approach to modularity, both of which also find community structure but do not require thresholding of the association matrix. In general modularity of brain functional networks was significantly reduced in COS, due to a relatively reduced density of intra-modular connections between neighboring regions. Other network measures of local organization such as clustering were also decreased, while complementary measures of global efficiency and robustness were increased, in the COS group. The group differences in complex network properties were mirrored by differences in simpler statistical properties of the data, such as the variability of the global time series and the internal homogeneity of the time series within anatomical regions of interest.
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              Inter-Regional Brain Communication and Its Disturbance in Autism

              In this review article, we summarize recent progress toward understanding disturbances in functional and anatomical brain connectivity in autism. Autism is a neurodevelopmental disorder affecting language, social interaction, and repetitive behaviors. Recent studies have suggested that limitations of frontal–posterior brain connectivity in autism underlie the varied set of deficits associated with this disorder. Specifically, the underconnectivity theory of autism postulates that individuals with autism have a reduced communication bandwidth between frontal and posterior cortical areas, which constrains the psychological processes that rely on the integrated functioning of frontal and posterior brain networks. This review summarizes the recent findings of reduced frontal–posterior functional connectivity (synchronization) in autism in a wide variety of high-level tasks, focusing on data from functional magnetic resonance imaging studies. It also summarizes the findings of disordered anatomical connectivity in autism, as measured by a variety of techniques, including distribution of white matter volumes and diffusion tensor imaging. We conclude with a discussion of the implications of these findings for autism and future directions for this line of research.
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                Author and article information

                Journal
                Front Syst Neurosci
                Front. Syst. Neurosci.
                Frontiers in Systems Neuroscience
                Frontiers Research Foundation
                1662-5137
                13 February 2012
                2012
                : 6
                : 3
                Affiliations
                [1] 1simpleBrain Imaging and Modeling Section, National Institute on Deafness and Other Communication Disorders, National Institutes of Health Bethesda, MD, USA
                [2] 2simpleHuman Motor Control Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health Bethesda, MD, USA
                Author notes
                Article
                10.3389/fnsys.2012.00003
                3277911
                22347849
                b6f5ec74-c971-41f4-a432-f3cad18c8879
                Copyright © 2012 Horwitz and Horovitz.

                This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited.

                History
                : 25 January 2012
                : 27 January 2012
                Page count
                Figures: 0, Tables: 0, Equations: 0, References: 15, Pages: 2, Words: 1531
                Categories
                Neuroscience
                Editorial

                Neurosciences
                Neurosciences

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