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      Three-dimensional reconstruction of laryngeal cancer with whole organ serial immunohistochemical sections

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          Abstract

          Three-dimensional (3D) image reconstruction of tumors based on serial histological sectioning is one of the most powerful methods for accurate high-resolution visualization of tumor structures. However, 3D histological reconstruction of whole tumor has not yet been achieved. We established a high-resolution 3D model of molecular marked whole laryngeal cancer by optimizing the currently available techniques. A series of 5,388 HE stained or immunohistochemically stained whole light microscopic images (200 ×) were acquired (15.61 TB).The data set of block-face images (96.2 GB) was also captured. Direct volume rendering of serial 6.25 × light microscopy images did not demonstrate the major characteristics of the laryngeal cancer as expected. Based on fusion of two datasets, the accurate boundary of laryngeal tumor bulk was visualized in an anatomically realistic context. In the regions of interest, micro tumor structure, budding, cell proliferation and tumor lymph vessels were well represented in 3D after segmentation, which highlighted the advantages of 3D reconstruction of light microscopy images. In conclusion, generating 3D digital histopathological images of a whole solid tumor based on current technology is feasible. However, data mining strategy should be developed for complete utilization of the large amount of data generated.

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          BigBrain: an ultrahigh-resolution 3D human brain model.

          Reference brains are indispensable tools in human brain mapping, enabling integration of multimodal data into an anatomically realistic standard space. Available reference brains, however, are restricted to the macroscopic scale and do not provide information on the functionally important microscopic dimension. We created an ultrahigh-resolution three-dimensional (3D) model of a human brain at nearly cellular resolution of 20 micrometers, based on the reconstruction of 7404 histological sections. "BigBrain" is a free, publicly available tool that provides considerable neuroanatomical insight into the human brain, thereby allowing the extraction of microscopic data for modeling and simulation. BigBrain enables testing of hypotheses on optimal path lengths between interconnected cortical regions or on spatial organization of genetic patterning, redefining the traditional neuroanatomy maps such as those of Brodmann and von Economo.
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            V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

            The V3D system provides three-dimensional (3D) visualization of gigabyte-sized microscopy image stacks in real time on current laptops and desktops. Combined with highly ergonomic features for selecting an X, Y, Z location of an image directly in 3D space and for visualizing overlays of a variety of surface objects, V3D streamlines the on-line analysis, measurement, and proofreading of complicated image patterns. V3D is cross-platform and can be enhanced by plug-ins. We built V3D-Neuron on top of V3D to reconstruct complex 3D neuronal structures from large brain images. V3D-Neuron enables us to precisely digitize the morphology of a single neuron in a fruit fly brain in minutes, with about 17-fold improvement in reliability and 10-fold savings in time compared to other neuron reconstruction tools. Using V3D-Neuron, we demonstrated the feasibility of building a 3D digital atlas of neurite tracts in the fruit fly brain.
              Bookmark
              • Record: found
              • Abstract: not found
              • Article: not found

              Recommendations for reporting tumor budding in colorectal cancer based on the International Tumor Budding Consensus Conference (ITBCC) 2016

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                Author and article information

                Contributors
                wbq_xylc@126.com
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                3 November 2020
                3 November 2020
                2020
                : 10
                : 18962
                Affiliations
                [1 ]GRID grid.24696.3f, ISNI 0000 0004 0369 153X, Department of Otolaryngology, Head & Neck Surgery, , Beijing Friendship Hospital, Capital Medical University, ; Beijing, China
                [2 ]Department of General Surgery, The General Hospital of Taiyuan Iron & Steel Company, Taiyuan, China
                [3 ]GRID grid.24696.3f, ISNI 0000 0004 0369 153X, Medical Department of Medical Insurance, , Beijing Friendship Hospital, Capital Medical University, ; Beijing, China
                [4 ]GRID grid.263452.4, ISNI 0000 0004 1798 4018, Imaging Department, , Shanxi Medical University, ; Taiyuan, China
                [5 ]GRID grid.451052.7, ISNI 0000 0004 0581 2008, Department of Otolaryngology, Head & Neck Surgery, , Guy’s & St Thomas NHS Hospital, ; London, UK
                [6 ]GRID grid.440601.7, ISNI 0000 0004 1798 0578, Department of Nursing, , Peking University Shenzhen Hospital, ; Shenzhen, China
                [7 ]GRID grid.452461.0, ISNI 0000 0004 1762 8478, Department of Otolaryngology, Head & Neck Surgery, , the First Hospital of Shanxi Medical University, ; No. 85, Jiefang South Road, Taiyuan, 030001 China
                [8 ]Department of Head and Neck Surgery, Shanxi Provincial Cancer Hospital, Taiyuan, China
                Article
                76081
                10.1038/s41598-020-76081-7
                7642254
                33144690
                b748709a-c444-465c-a16c-c4cf2ae25263
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 1 May 2020
                : 22 October 2020
                Funding
                Funded by: The Key Research and Development Program Funding of Shanxi Province
                Award ID: 201603D121039
                Award Recipient :
                Funded by: Shanxi Natural Science Foundation
                Award ID: 201801D121344
                Categories
                Article
                Custom metadata
                © The Author(s) 2020

                Uncategorized
                imaging,immunological techniques,microscopy,cancer imaging
                Uncategorized
                imaging, immunological techniques, microscopy, cancer imaging

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