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      SPIDYAN, a MATLAB library for simulating pulse EPR experiments with arbitrary waveform excitation.

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          Abstract

          Frequency-swept chirp pulses, created with arbitrary waveform generators (AWGs), can achieve inversion over a range of several hundreds of MHz. Such passage pulses provide defined flip angles and increase sensitivity. The fact that spectra are not excited at once, but single transitions are passed one after another, can cause new effects in established pulse EPR sequences. We developed a MATLAB library for simulation of pulse EPR, which is especially suited for modeling spin dynamics in ultra-wideband (UWB) EPR experiments, but can also be used for other experiments and NMR. At present the command line controlled SPin DYnamics ANalysis (SPIDYAN) package supports one-spin and two-spin systems with arbitrary spin quantum numbers. By providing the program with appropriate spin operators and Hamiltonian matrices any spin system is accessible, with limits set only by available memory and computation time. Any pulse sequence using rectangular and linearly or variable-rate frequency-swept chirp pulses, including phase cycling can be quickly created. To keep track of spin evolution the user can choose from a vast variety of detection operators, including transition selective operators. If relaxation effects can be neglected, the program solves the Liouville-von Neumann equation and propagates spin density matrices. In the other cases SPIDYAN uses the quantum mechanical master equation and Liouvillians for propagation. In order to consider the resonator response function, which on the scale of UWB excitation limits bandwidth, the program includes a simple RLC circuit model. Another subroutine can compute waveforms that, for a given resonator, maintain a constant critical adiabaticity factor over the excitation band. Computational efficiency is enhanced by precomputing propagator lookup tables for the whole set of AWG output levels. The features of the software library are discussed and demonstrated with spin-echo and population transfer simulations.

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          Author and article information

          Journal
          J. Magn. Reson.
          Journal of magnetic resonance (San Diego, Calif. : 1997)
          Elsevier BV
          1096-0856
          1090-7807
          Feb 2016
          : 263
          Affiliations
          [1 ] ETH Zurich, Lab. Phys. Chem., Vladimir-Prelog Weg 2, 8093 Zurich, Switzerland.
          Article
          S1090-7807(15)00315-8
          10.1016/j.jmr.2015.12.014
          26773526
          baf2b92f-4b0c-4acf-afd6-5b9c0624b205
          History

          Adiabatic passage,Coherence transfer,Density operators,Electron paramagnetic resonance (EPR),Electron spin echo envelope modulation (ESEEM),NMR,Polarization enhancement,Spin dynamics

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