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      Identification and Characterization of Leaf-Inhabiting Fungi from Castanea Plantations in China

      research-article
      Author(s): , , *
      Publication date (Electronic):
      Journal: Journal of Fungi
      Publisher: MDPI
      Keywords: Castanea henryi, C. mollissima, Diaporthales, phylogeny, Sporocadaceae, taxonomy

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          Abstract

          Two Castanea plant species, C. henryi and C. mollissima, are cultivated in China to produce chestnut crops. Leaf spot diseases commonly occur in Castanea plantations, however, little is known about the fungal species associated with chestnut leaf spots. In this study, leaf samples of C. henryi and C. mollissima were collected from Beijing, Guizhou, Hunan, Sichuan and Yunnan Provinces, and leaf-inhabiting fungi were identified based on morphology and phylogeny. As a result, twenty-six fungal species were confirmed, including one new family, one new genus, and five new species. The new taxa are Pyrisporaceae fam. nov., Pyrispora gen. nov., Aureobasidium castaneae sp. nov., Discosia castaneae sp. nov., Monochaetia castaneae sp. nov., Neopestalotiopsis sichuanensis sp. nov. and Pyrispora castaneae sp. nov.

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          AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS

          T.J White, T. Bruns, S. Lee … (1990)
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            MrBayes 3: Bayesian phylogenetic inference under mixed models.

            Fredrik Ronquist, John P. Huelsenbeck (2003)
            MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models. This allows the user to analyze heterogeneous data sets consisting of different data types-e.g. morphological, nucleotide, and protein-and to explore a wide variety of structured models mixing partition-unique and shared parameters. The program employs MPI to parallelize Metropolis coupling on Macintosh or UNIX clusters.
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              Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes.

              N Glass, G C Donaldson (1995)
              We constructed nine sets of oligonucleotide primers on the basis of the results of DNA hybridization of cloned genes from Neurospora crassa and Aspergillus nidulans to the genomes of select filamentous ascomycetes and deuteromycetes (with filamentous ascomycete affiliations). Nine sets of primers were designed to amplify segments of DNA that span one or more introns in conserved genes. PCR DNA amplification with the nine primer sets with genomic DNA from ascomycetes, deuteromycetes, basidiomycetes, and plants revealed that five of the primer sets amplified a product only from DNA of the filamentous ascomycetes and deuteromycetes. The five primer sets were constructed from the N. crassa genes for histone 3, histone 4, beta-tubulin, and the plasma membrane ATPase. With these five primer sets, polymorphisms were observed in both the size of and restriction enzyme sites in the amplified products from the filamentous ascomycetes. The primer sets described here may provide useful tools for phylogenetic studies and genome analyses in filamentous ascomycetes and deuteromycetes (with ascomycete affiliations), as well as for the rapid differentiation of fungal species by PCR.
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                Author and article information

                Journal
                Journal ID (nlm-ta): J Fungi (Basel)
                Journal ID (iso-abbrev): J Fungi (Basel)
                Journal ID (publisher-id): jof
                Title: Journal of Fungi
                Publisher: MDPI
                ISSN (Electronic): 2309-608X
                Publication date (Electronic): 18 January 2021
                Publication date Collection: January 2021
                Volume: 7
                Issue: 1
                Electronic Location Identifier: 64
                Affiliations
                The Key Laboratory for Silviculture and Conservation of Ministry of Education, Beijing Forestry University, Beijing 100083, China; 13146723574@ 123456163.com (N.J.); xinleifan@ 123456bjfu.edu.cn (X.F.)
                Author notes
                [* ]Correspondence: chengmt@ 123456bjfu.edu.cn
                Author information
                https://orcid.org/0000-0002-9656-8500
                Article
                Publisher ID: jof-07-00064
                DOI: 10.3390/jof7010064
                PMC ID: 7831338
                PubMed ID: 33477575
                SO-VID: be36c9e5-543a-4092-bc2e-ae67b1027795
                Copyright © © 2021 by the authors.
                License:

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                Date received : 22 December 2020
                Date accepted : 15 January 2021
                Categories
                Subject: Article

                Keywords: castanea henryi,c. mollissima,diaporthales,phylogeny,sporocadaceae,taxonomy
                Data availability:
                Keywords: castanea henryi, c. mollissima, diaporthales, phylogeny, sporocadaceae, taxonomy

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