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      Joint modelling of longitudinal and time-to-event data with application to predicting abdominal aortic aneurysm growth and rupture

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          Abstract

          Shared random effects joint models are becoming increasingly popular for investigating the relationship between longitudinal and time-to-event data. Although appealing, such complex models are computationally intensive, and quick, approximate methods may provide a reasonable alternative. In this paper, we first compare the shared random effects model with two approximate approaches: a naïve proportional hazards model with time-dependent covariate and a two-stage joint model, which uses plug-in estimates of the fitted values from a longitudinal analysis as covariates in a survival model. We show that the approximate approaches should be avoided since they can severely underestimate any association between the current underlying longitudinal value and the event hazard. We present classical and Bayesian implementations of the shared random effects model and highlight the advantages of the latter for making predictions. We then apply the models described to a study of abdominal aortic aneurysms (AAA) to investigate the association between AAA diameter and the hazard of AAA rupture. Out-of-sample predictions of future AAA growth and hazard of rupture are derived from Bayesian posterior predictive distributions, which are easily calculated within an MCMC framework. Finally, using a multivariate survival sub-model we show that underlying diameter rather than the rate of growth is the most important predictor of AAA rupture.

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          Most cited references27

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          PyMC: Bayesian Stochastic Modelling in Python.

          This user guide describes a Python package, PyMC, that allows users to efficiently code a probabilistic model and draw samples from its posterior distribution using Markov chain Monte Carlo techniques.
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            Joint modelling of longitudinal measurements and event time data.

            This paper formulates a class of models for the joint behaviour of a sequence of longitudinal measurements and an associated sequence of event times, including single-event survival data. This class includes and extends a number of specific models which have been proposed recently, and, in the absence of association, reduces to separate models for the measurements and events based, respectively, on a normal linear model with correlated errors and a semi-parametric proportional hazards or intensity model with frailty. Special cases of the model class are discussed in detail and an estimation procedure which allows the two components to be linked through a latent stochastic process is described. Methods are illustrated using results from a clinical trial into the treatment of schizophrenia.
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              Abdominal aortic aneurysm expansion: risk factors and time intervals for surveillance.

              Intervention to reduce abdominal aortic aneurysm (AAA) expansion and optimization of screening intervals would improve current surveillance programs. The aim of this study was to characterize AAA growth in a national cohort of patients with AAA both overall and by cardiovascular risk factors. In this study, 1743 patients were monitored for changes in AAA diameter by ultrasonography over a mean follow-up of 1.9 years. Mean initial AAA diameter and growth rate were 43 mm (range 28 to 85 mm) and 2.6 mm/year (95% range, -1.0 to 6.1 mm/year), respectively. Baseline diameter was strongly associated with growth, suggesting that AAA growth accelerates as the aneurysm enlarges. AAA growth rate was lower in those with low ankle/brachial pressure index and diabetes but higher for current smokers (all P<0.001). No other factor (including lipids and blood pressure) was associated with AAA growth. Intervals of 36, 24, 12, and 3 months for aneurysms of 35, 40, 45, and 50 mm, respectively, would restrict the probability of breaching the 55-mm limit at rescreening to below 1%. Annual, or less frequent, surveillance intervals are safe for all AAAs < or =45 mm in diameter. Smoking increases AAA growth, but atherosclerosis plays a minor role.
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                Author and article information

                Journal
                Biom J
                Biom J
                bimj
                Biometrical Journal. Biometrische Zeitschrift
                WILEY-VCH Verlag (Weinheim )
                0323-3847
                1521-4036
                September 2011
                10 August 2011
                : 53
                : 5
                : 750-763
                Affiliations
                simpleMRC Biostatistics Unit, Institute of Public Health Robinson Way, Cambridge, CB2 0SR, UK
                Author notes
                *Corresponding author: e-mail: michael.sweeting@ 123456mrc-bsu.cam.ac.uk , Phone: +44-1223-768257, Fax: +44-1223-760729

                Supporting Information for this article is available from the author or on the WWW under http://dx.doi.org/10.1002/bimj.201100052

                Article
                10.1002/bimj.201100052
                3443386
                21834127
                c08e844f-488b-495a-9612-eea728d74e3d
                Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim

                Re-use of this article is permitted in accordance with the Creative Commons Deed, Attribution 2.5, which does not permit commercial exploitation.

                History
                : 02 March 2011
                : 21 June 2011
                : 28 June 2011
                Categories
                Research Articles

                Quantitative & Systems biology
                shared random effects,hierarchical model,joint model,prediction,abdominal aortic aneurysm

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