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      Transcriptional regulation by Ferric Uptake Regulator (Fur) in pathogenic bacteria

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          Abstract

          In the ancient anaerobic environment, ferrous iron (Fe 2+) was one of the first metal cofactors. Oxygenation of the ancient world challenged bacteria to acquire the insoluble ferric iron (Fe 3+) and later to defend against reactive oxygen species (ROS) generated by the Fenton chemistry. To acquire Fe 3+, bacteria produce low-molecular weight compounds, known as siderophores, which have extremely high affinity for Fe 3+. However, during infection the host restricts iron from pathogens by producing iron- and siderophore-chelating proteins, by exporting iron from intracellular pathogen-containing compartments, and by limiting absorption of dietary iron. Ferric Uptake Regulator (Fur) is a transcription factor which utilizes Fe 2+ as a corepressor and represses siderophore synthesis in pathogens. Fur, directly or indirectly, controls expression of enzymes that protect against ROS damage. Thus, the challenges of iron homeostasis and defense against ROS are addressed via Fur. Although the role of Fur as a repressor is well-documented, emerging evidence demonstrates that Fur can function as an activator. Fur activation can occur through three distinct mechanisms (1) indirectly via small RNAs, (2) binding at cis regulatory elements that enhance recruitment of the RNA polymerase holoenzyme (RNAP), and (3) functioning as an antirepressor by removing or blocking DNA binding of a repressor of transcription. In addition, Fur homologs control defense against peroxide stress (PerR) and control uptake of other metals such as zinc (Zur) and manganese (Mur) in pathogenic bacteria. Fur family members are important for virulence within bacterial pathogens since mutants of fur, perR, or zur exhibit reduced virulence within numerous animal and plant models of infection. This review focuses on the breadth of Fur regulation in pathogenic bacteria.

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          Most cited references204

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          A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli.

          A small RNA, RyhB, was found as part of a genomewide search for novel small RNAs in Escherichia coli. The RyhB 90-nt RNA down-regulates a set of iron-storage and iron-using proteins when iron is limiting; it is itself negatively regulated by the ferric uptake repressor protein, Fur (Ferric uptake regulator). RyhB RNA levels are inversely correlated with mRNA levels for the sdhCDAB operon, encoding succinate dehydrogenase, as well as five other genes previously shown to be positively regulated by Fur by an unknown mechanism. These include two other genes encoding enzymes in the tricarboxylic acid cycle, acnA and fumA, two ferritin genes, ftnA and bfr, and a gene for superoxide dismutase, sodB. Fur positive regulation of all these genes is fully reversed in an ryhB mutant. Our results explain the previously observed inability of fur mutants to grow on succinate. RyhB requires the RNA-binding protein, Hfq, for activity. Sequences within RyhB are complementary to regions within each of the target genes, suggesting that RyhB acts as an antisense RNA. In sdhCDAB, the complementary region is at the end of the first gene of the sdhCDAB operon; full-length sdhCDAB message disappears and a truncated message, equivalent in size to the region upstream of the complementarity, is detected when RyhB is expressed. RyhB provides a mechanism for the cell to down-regulate iron-storage proteins and nonessential iron-containing proteins when iron is limiting, thus modulating intracellular iron usage to supplement mechanisms for iron uptake directly regulated by Fur.
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            IL-6 mediates hypoferremia of inflammation by inducing the synthesis of the iron regulatory hormone hepcidin.

            Hypoferremia is a common response to systemic infections or generalized inflammatory disorders. In mouse models, the development of hypoferremia during inflammation requires hepcidin, an iron regulatory peptide hormone produced in the liver, but the inflammatory signals that regulate hepcidin are largely unknown. Our studies in human liver cell cultures, mice, and human volunteers indicate that IL-6 is the necessary and sufficient cytokine for the induction of hepcidin during inflammation and that the IL-6-hepcidin axis is responsible for the hypoferremia of inflammation.
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              Metal chelation and inhibition of bacterial growth in tissue abscesses.

              Bacterial infection often results in the formation of tissue abscesses, which represent the primary site of interaction between invading bacteria and the innate immune system. We identify the host protein calprotectin as a neutrophil-dependent factor expressed inside Staphylococcus aureus abscesses. Neutrophil-derived calprotectin inhibited S. aureus growth through chelation of nutrient Mn2+ and Zn2+: an activity that results in reprogramming of the bacterial transcriptome. The abscesses of mice lacking calprotectin were enriched in metal, and staphylococcal proliferation was enhanced in these metal-rich abscesses. These results demonstrate that calprotectin is a critical factor in the innate immune response to infection and define metal chelation as a strategy for inhibiting microbial growth inside abscessed tissue.
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                Author and article information

                Journal
                Front Cell Infect Microbiol
                Front Cell Infect Microbiol
                Front. Cell. Infect. Microbiol.
                Frontiers in Cellular and Infection Microbiology
                Frontiers Media S.A.
                2235-2988
                02 October 2013
                2013
                : 3
                : 59
                Affiliations
                [1] 1Department of Immunology and Microbiology, Indiana University School of Medicine Indianapolis, IN, USA
                [2] 2Prestage Department of Poultry Science, North Carolina State University Raleigh, NC, USA
                Author notes

                Edited by: Mathieu F. Cellier, Institut National de la Recherche Scientifique, Canada

                Reviewed by: John Helmann, Cornell University, USA; Klaus Hantke, Universität Tübingen, Germany; Caroline Genco, Boston University School of Medicine, USA

                *Correspondence: Hosni M. Hassan, Prestage Department of Poultry Science, North Carolina State University, 334C Scott Hall, Campus Box 7608, Raleigh, NC 27695-7608, USA e-mail: hmhassan@ 123456ncsu.edu

                This article was submitted to the journal Frontiers in Cellular and Infection Microbiology.

                †Present address: Bryan Troxell, Prestage Department of Poultry Science, North Carolina State University, Raleigh, USA

                Article
                10.3389/fcimb.2013.00059
                3788343
                24106689
                c6925aed-22eb-40b0-933d-277696fba8d1
                Copyright © 2013 Troxell and Hassan.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 24 July 2013
                : 18 September 2013
                Page count
                Figures: 2, Tables: 1, Equations: 0, References: 222, Pages: 13, Words: 13103
                Categories
                Microbiology
                Review Article

                Infectious disease & Microbiology
                ferric uptake regulator,iron,oxidative stress,gene regulation,pathogenic bacteria

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