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      FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes.

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          Abstract

          We present a simple but powerful procedure to extract Gene Ontology (GO) terms that are significantly over- or under-represented in sets of genes within the context of a genome-scale experiment (DNA microarray, proteomics, etc.). Said procedure has been implemented as a web application, FatiGO, allowing for easy and interactive querying. FatiGO, which takes the multiple-testing nature of statistical contrast into account, currently includes GO associations for diverse organisms (human, mouse, fly, worm and yeast) and the TrEMBL/Swissprot GOAnnotations@EBI correspondences from the European Bioinformatics Institute.

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          Author and article information

          Journal
          Bioinformatics
          Bioinformatics (Oxford, England)
          Oxford University Press (OUP)
          1367-4803
          1367-4803
          Mar 01 2004
          : 20
          : 4
          Affiliations
          [1 ] Bioinformatics Unit, Centro Nacional de Investigaciones Oncológicas (CNIO), Melchor Fernández Almagro 3, 28029 Madrid, Spain.
          Article
          btg455
          10.1093/bioinformatics/btg455
          14990455
          c9460051-5681-46f1-8791-79da4f8190ed
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