24
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Single-pulse enhanced coherent diffraction imaging of bacteria with an X-ray free-electron laser

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          High-resolution imaging offers one of the most promising approaches for exploring and understanding the structure and function of biomaterials and biological systems. X-ray free-electron lasers (XFELs) combined with coherent diffraction imaging can theoretically provide high-resolution spatial information regarding biological materials using a single XFEL pulse. Currently, the application of this method suffers from the low scattering cross-section of biomaterials and X-ray damage to the sample. However, XFELs can provide pulses of such short duration that the data can be collected using the “diffract and destroy” approach before the effects of radiation damage on the data become significant. These experiments combine the use of enhanced coherent diffraction imaging with single-shot XFEL radiation to investigate the cellular architecture of Staphylococcus aureus with and without labeling by gold (Au) nanoclusters. The resolution of the images reconstructed from these diffraction patterns were twice as high or more for gold-labeled samples, demonstrating that this enhancement method provides a promising approach for the high-resolution imaging of biomaterials and biological systems.

          Related collections

          Most cited references30

          • Record: found
          • Abstract: found
          • Article: not found

          The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules.

          Radiation damage is the main problem which prevents the determination of the structure of a single biological macromolecule at atomic resolution using any kind of microscopy. This is true whether neutrons, electrons or X-rays are used as the illumination. For neutrons, the cross-section for nuclear capture and the associated energy deposition and radiation damage could be reduced by using samples that are fully deuterated and 15N-labelled and by using fast neutrons, but single molecule biological microscopy is still not feasible. For naturally occurring biological material, electrons at present provide the most information for a given amount of radiation damage. Using phase contrast electron microscopy on biological molecules and macromolecular assemblies of approximately 10(5) molecular weight and above, there is in theory enough information present in the image to allow determination of the position and orientation of individual particles: the application of averaging methods can then be used to provide an atomic resolution structure. The images of approximately 10,000 particles are required. Below 10(5) molecular weight, some kind of crystal or other geometrically ordered aggregate is necessary to provide a sufficiently high combined molecular weight to allow for the alignment. In practice, the present quality of the best images still falls short of that attainable in theory and this means that a greater number of particles must be averaged and that the molecular weight limitation is somewhat larger than the predicted limit. For X-rays, the amount of damage per useful elastic scattering event is several hundred times greater than for electrons at all wavelengths and energies and therefore the requirements on specimen size and number of particles are correspondingly larger. Because of the lack of sufficiently bright neutron sources in the foreseeable future, electron microscopy in practice provides the greatest potential for immediate progress.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Reconstruction of an object from the modulus of its Fourier transform.

            J Fienup (1978)
            We present a digital method for solving the phase-retrieval problem of optical-coherence theory: the reconstruction of a general object from the modulus of its Fourier transform. This technique should be useful for obtaining high-resolution imagery from interferometer data.
              Bookmark
              • Record: found
              • Abstract: not found
              • Article: not found

              Magnetotactic bacteria and magnetosomes.

                Bookmark

                Author and article information

                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group
                2045-2322
                23 September 2016
                2016
                : 6
                : 34008
                Affiliations
                [1 ]State Key Laboratory of Crystal Materials, Shandong University , Jinan 250100, China
                [2 ]Chinese Academy of Sciences Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, Institute of High Energy Physics, Chinese Academy of Sciences , Beijing 100049, China
                [3 ]RIKEN SPring-8 Center , Kouto 1-1-1, Sayo, Hyogo 679-5148, Japan
                [4 ]Department of Physics and Astronomy and California NanoSystems Institute, University of California Los Angeles , California 90095, USA
                [5 ]School of Materials Science and Engineering, Gwangju Institute of Science and Technology , Gwangju 61005, Korea
                [6 ]Department of Physics , POSTECH, Pohang 790-784, Korea
                [7 ]Japan Synchrotron Radiation Research Institute (JASRI) , 1-1-1 Kouto, Sayo, Hyogo 679-5198, Japan
                [8 ]Shanghai Synchrotron Radiation Facility, Shanghai Institute of Applied Physics, Chinese Academy of Sciences , Shanghai 201800, China
                [9 ]iHuman Institute, Shanghai Tech University , Shanghai 201210, China
                [10 ]School of Physical Science and Technology, Shanghai Tech University , Shanghai 201210, China
                Author notes
                Article
                srep34008
                10.1038/srep34008
                5034275
                27659203
                c9f8aaca-0d7e-4e1a-b03e-5e75d67e96d9
                Copyright © 2016, The Author(s)

                This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

                History
                : 25 March 2015
                : 06 September 2016
                Categories
                Article

                Uncategorized
                Uncategorized

                Comments

                Comment on this article