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      Transcriptional factor six2 promotes the competitive endogenous RNA network between CYP4Z1 and pseudogene CYP4Z2P responsible for maintaining the stemness of breast cancer cells

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          Abstract

          Background

          The expression of CYP4Z1 and the pseudogene CYP4Z2P has been shown to be specifically increased in breast cancer by our group and others. Additionally, we previously revealed the roles of the competitive endogenous RNA (ceRNA) network mediated by these genes (ceRNET_CC) in breast cancer angiogenesis, apoptosis, and tamoxifen resistance. However, the roles of ceRNET_CC in regulating the stemness of breast cancer cells and the mechanisms through which ceRNET_CC is regulated remain unclear.

          Methods

          Transcriptional factor six2, CYP4Z1-3′UTR, and CYP4Z2P-3′UTR were stably overexpressed or knocked down in breast cancer cells via lentivirus infection. ChIP-sequencing and RNA-sequencing analysis were performed to reveal the mechanism through which ceRNET_CC is regulated and the transcriptome change mediated by ceRNET_CC. Clinical samples were used to validate the correlation between six2 and ceRNET_CC. Finally, the effects of the six2/ceRNET_CC axis on the stemness of breast cancer cells and chemotherapy sensitivity were evaluated by in vitro and in vivo experiments.

          Results

          We revealed that ceRNET_CC promoted the stemness of breast cancer cells. Mechanistically, six2 activated ceRNET_CC by directly binding to their promoters, thus activating the downstream PI3K/Akt and ERK1/2 pathways. Finally, we demonstrated that the six2/ceRNET_CC axis was involved in chemoresistance.

          Conclusions

          Our results uncover the mechanism through which ceRNET_CC is regulated, identify novel roles for the six2/ceRNET_CC axis in regulating the stemness of breast cancer cells, and propose the possibility of targeting the six2/ceRNET_CC axis to inhibit breast cancer stem cell (CSC) traits.

          Electronic supplementary material

          The online version of this article (10.1186/s13045-019-0697-6) contains supplementary material, which is available to authorized users.

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          Most cited references35

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          miRpower: a web-tool to validate survival-associated miRNAs utilizing expression data from 2178 breast cancer patients.

          The proper validation of prognostic biomarkers is an important clinical issue in breast cancer research. MicroRNAs (miRNAs) have emerged as a new class of promising breast cancer biomarkers. In the present work, we developed an integrated online bioinformatic tool to validate the prognostic relevance of miRNAs in breast cancer.
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            Six2 defines and regulates a multipotent self-renewing nephron progenitor population throughout mammalian kidney development.

            Nephrons, the basic functional units of the kidney, are generated repetitively during kidney organogenesis from a mesenchymal progenitor population. Which cells within this pool give rise to nephrons and how multiple nephron lineages form during this protracted developmental process are unclear. We demonstrate that the Six2-expressing cap mesenchyme represents a multipotent nephron progenitor population. Six2-expressing cells give rise to all cell types of the main body of the nephron during all stages of nephrogenesis. Pulse labeling of Six2-expressing nephron progenitors at the onset of kidney development suggests that the Six2-expressing population is maintained by self-renewal. Clonal analysis indicates that at least some Six2-expressing cells are multipotent, contributing to multiple domains of the nephron. Furthermore, Six2 functions cell autonomously to maintain a progenitor cell status, as cap mesenchyme cells lacking Six2 activity contribute to ectopic nephron tubules, a mechanism dependent on a Wnt9b inductive signal. Taken together, our observations suggest that Six2 activity cell-autonomously regulates a multipotent nephron progenitor population.
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              Module map of stem cell genes guides creation of epithelial cancer stem cells.

              Self-renewal is a hallmark of stem cells and cancer, but existence of a shared stemness program remains controversial. Here, we construct a gene module map to systematically relate transcriptional programs in embryonic stem cells (ESCs), adult tissue stem cells, and human cancers. This map reveals two predominant gene modules that distinguish ESCs and adult tissue stem cells. The ESC-like transcriptional program is activated in diverse human epithelial cancers and strongly predicts metastasis and death. c-Myc, but not other oncogenes, is sufficient to reactivate the ESC-like program in normal and cancer cells. In primary human keratinocytes transformed by Ras and I kappa B alpha, c-Myc increases the fraction of tumor-initiating cells by 150-fold, enabling tumor formation and serial propagation with as few as 500 cells. c-Myc-enhanced tumor initiation is cell-autonomous and independent of genomic instability. Thus, activation of an ESC-like transcriptional program in differentiated adult cells may induce pathologic self-renewal characteristic of cancer stem cells.
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                Author and article information

                Contributors
                zhlf@cpu.edu.cn
                545948829@qq.com
                1017317643@qq.com
                liushijia2011@163.com
                13861579633@126.com
                langaoing@qq.com
                1452342935@qq.com
                331663123@qq.com
                2649406210@qq.com
                381733818@qq.com
                111840@qq.com
                13861579633@126.com
                + 86 25 8327 1022 , xiaoman1205@163.com
                + 86 25 8327 1022 , xitao18@hotmail.com
                Journal
                J Hematol Oncol
                J Hematol Oncol
                Journal of Hematology & Oncology
                BioMed Central (London )
                1756-8722
                4 March 2019
                4 March 2019
                2019
                : 12
                : 23
                Affiliations
                [1 ]ISNI 0000 0000 9776 7793, GRID grid.254147.1, Jiangsu Key Laboratory of Carcinogenesis and Intervention, School of Life Science and Technology, , China Pharmaceutical University, ; 24 Tong Jia Xiang, Nanjing, 210009 China
                [2 ]ISNI 0000 0004 1765 1045, GRID grid.410745.3, Jiangsu Key Laboratory for Pharmacology and Safety Evaluation of Chinese Materia Medica, School of Pharmacy, , Nanjing University of Chinese Medicine, ; Nanjing, 210023 China
                [3 ]GRID grid.413389.4, Department of Pathology, , The Affiliated Hospital of Xuzhou Medical University, ; Xuzhou, 221002 Jiangsu China
                [4 ]ISNI 0000 0004 1790 425X, GRID grid.452524.0, Department of Pharmacy, , Jiangsu Province Hospital of TCM, ; Nanjing, 210023 China
                [5 ]Department of Clinical Laboratory, Huai An First People’s Hospital, Huai An, 223300 China
                [6 ]ISNI 0000 0004 1790 425X, GRID grid.452524.0, Department of Pathology, , Jiangsu Province Hospital of TCM, ; Nanjing, 210023 China
                Author information
                https://orcid.org/0000-0001-8065-2639
                Article
                697
                10.1186/s13045-019-0697-6
                6399913
                30832689
                ca57ab65-9ff6-4688-8707-d8da4e189241
                © The Author(s). 2019

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 30 September 2018
                : 13 January 2019
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100001809, National Natural Science Foundation of China;
                Award ID: No. 81702957
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100010031, Postdoctoral Research Foundation of China;
                Award ID: No.2017M620230
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100010246, Postdoctoral Science Foundation of Jiangsu Province;
                Award ID: No.1701197B
                Award Recipient :
                Categories
                Research
                Custom metadata
                © The Author(s) 2019

                Oncology & Radiotherapy
                cyp4z1,pseudogene cyp4z2p,cernet_cc,six2,stemness,chemoresistance,breast cancer
                Oncology & Radiotherapy
                cyp4z1, pseudogene cyp4z2p, cernet_cc, six2, stemness, chemoresistance, breast cancer

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