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      The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used

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          Abstract

          Background

          Peroxiredoxins are ubiquitous thiol-dependent peroxidases that represent a major antioxidant defense in both prokaryotic cells and eukaryotic organisms. Among the six vertebrate peroxiredoxin isoforms, peroxiredoxin-5 (PRDX5) appears to be a particular peroxiredoxin, displaying a different catalytic mechanism, as well as a wider substrate specificity and subcellular distribution. In addition, several evolutionary peculiarities, such as loss of subcellular targeting in certain species, have been reported for this enzyme.

          Results

          Western blotting analyses of 2-cys PRDXs (PRDX1–5) failed to identify the PRDX5 isoform in chicken tissue homogenates. Thereafter, via in silico analysis of PRDX5 orthologs, we went on to show that the PRDX5 gene is conserved in all branches of the amniotes clade, with the exception of aves. Further investigation of bird genomic sequences and expressed tag sequences confirmed the disappearance of the gene, though TRMT112, a gene located closely to the 5′ extremity of the PRDX5 gene, is conserved. Finally, using in ovo electroporation to overexpress the long and short forms of human PRDX5, we showed that, though the gene is lost in birds, subcellular targeting of human PRDX5 is conserved in the chick.

          Conclusions

          Further adding to the distinctiveness of this enzyme, this study reports converging evidence supporting loss of PRDX5 in aves. In-depth analysis revealed that this absence is proper to birds as PRDX5 appears to be conserved in non-avian amniotes. Finally, taking advantage of the in ovo electroporation technique, we validate the subcellular targeting of human PRDX5 in the chick embryo and bring forward this gain-of-function model as a potent way to study PRDX5 functions in vivo.

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          Most cited references58

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          Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

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            Free Radicals in Biology and Medicine

            Free Radicals in Biology and Medicine has become a classic text in the field of free radical and antioxidant research since its first publication in 1985. <br> This latest edition has been comprehensively rewritten and updated (over 80% of the text is new), while maintaining the clarity of its predecessor. There is expanded coverage of isoprostanes and related compounds, mechanisms of oxidative damage to DNA and proteins (and the repair of such damage), the free radical theory of aging and the roles played by reactive species in signal transduction, cell death, human reproduction, and other important biological events. Greater emphasis has also been placed on the methods available to measure reactive species and oxidative damage (and their potential pitfalls), as well as the importance of antioxidants in the human diet. <br> This book is recommended as a comprehensive introduction to the field for students, clinicians and researchers, and an invaluable companion to all those interested in the role of free radicals in the life and biomedical sciences.
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              Structure, mechanism and regulation of peroxiredoxins

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                Author and article information

                Contributors
                pirson.marc@gmail.com
                andre.clippe@uclouvain.be
                bernard.knoops@uclouvain.be
                Journal
                BMC Evol Biol
                BMC Evol. Biol
                BMC Evolutionary Biology
                BioMed Central (London )
                1471-2148
                8 February 2018
                8 February 2018
                2018
                : 18
                : 18
                Affiliations
                ISNI 0000 0001 2294 713X, GRID grid.7942.8, Group of Animal Molecular and Cellular Biology, , Institut des Sciences de la Vie (ISV), Université catholique de Louvain, ; 4-5 Place Croix du Sud, 1348 Louvain-la-Neuve, Belgium
                Author information
                http://orcid.org/0000-0001-5018-5072
                Article
                1135
                10.1186/s12862-018-1135-z
                5806436
                29422028
                cc2a233c-dd48-41b0-97e8-b2eed5bdedbd
                © The Author(s). 2018

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 10 July 2017
                : 31 January 2018
                Funding
                Funded by: FRIA fellowship (FRS-FNRS, Belgium)
                Funded by: DIANE research program of the Walloon region
                Award ID: 816844
                Award Recipient :
                Funded by: Communauté française de Belgique - Actions de Recherche Concertées (ARC)
                Award ID: #10/15-026
                Award Recipient :
                Categories
                Research Article
                Custom metadata
                © The Author(s) 2018

                Evolutionary Biology
                peroxiredoxin-5,aves,birds,amniotes,vertebrates,trmt112,gene loss,gain-of-function
                Evolutionary Biology
                peroxiredoxin-5, aves, birds, amniotes, vertebrates, trmt112, gene loss, gain-of-function

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