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      The genus Lactarius s. str. ( Basidiomycota, Russulales) in Togo (West Africa): phylogeny and a new species described

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          Abstract

          Lactarius s. str. represents a monophyletic group of about 40 species in tropical Africa, although the delimitation of the genus from Lactifluus is still in progress. Recent molecular phylogenetic and taxonomic revisions have led to numerous changes in names of tropical species formerly referred to Lactarius. To better circumscribe the genus Lactarius in Togo, we combined morphological data with sequence analyses and phylogeny inference of rDNA ITS sequences. Morphological and molecular data were generated from specimens sampled in various native woodlands and riverside forests; Lactarioid- and Russula sequences from public GenBank NCBI, and UNITE are included for phylogenetic analysis. The Maximum likelihood phylogeny tree inferred from aligned sequences supports the phylogenetic position of the studied samples from Togo within the subgenera Piperites, and Plinthogali.

          Lactarius s. str. includes about 13 species described from West Africa, of which eight were not previously known from Togo, including one new species: Lactarius subbaliophaeus identifiable by the presence of winged basidiospores, a pallisadic pileipellis with a uprapellis composed of cylindrical cells, inconspicuous pleurocystidia, and fusiform or tortuous, often tapering apex marginal cells. It can also be recognised by a transparent white latex that turns pinkish and then blackish, and a bluish reaction of the flesh context with FeSO 4. These features mentioned do not match any of the morpho-anatomically most similar species, notably L. baliophaeus and L. griseogalus.

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          Current state and perspectives of fungal DNA barcoding and rapid identification procedures.

          Fungal research is experiencing a new wave of methodological improvements that most probably will boost mycology as profoundly as molecular phylogeny has done during the last 15 years. Especially the next generation sequencing technologies can be expected to have a tremendous effect on fungal biodiversity and ecology research. In order to realise the full potential of these exciting techniques by accelerating biodiversity assessments, identification procedures of fungi need to be adapted to the emerging demands of modern large-scale ecological studies. But how should fungal species be identified in the near future? While the answer might seem trivial to most microbiologists, taxonomists working with fungi may have other views. In the present review, we will analyse the state of the art of the so-called barcoding initiatives in the light of fungi, and we will seek to evaluate emerging trends in the field. We will furthermore demonstrate that the usability of DNA barcoding as a major tool for identification of fungi largely depends on the development of high-quality sequence databases that are thoroughly curated by taxonomists and systematists.
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            Ectomycorrhizal symbiosis of tropical African trees.

            The diversity, ecology and function of ectomycorrhizal (EM) fungi and ectomycorrhizas (ECMs) on tropical African tree species are reviewed here. While ECMs are the most frequent mycorrhizal type in temperate and boreal forests, they concern an economically and ecologically important minority of plants in African tropical forests. In these African tropical forests, ECMs are found mainly on caesalpionioid legumes, Sarcolaenaceae, Dipterocarpaceae, Asterpeiaceae, Phyllantaceae, Sapotaceae, Papilionoideae, Gnetaceae and Proteaceae, and distributed in open, gallery and rainforests of the Guineo-Congolian basin, Zambezian Miombo woodlands of East and South-Central Africa and Sudanian savannah woodlands of the sub-sahara. Overall, EM status was confirmed in 93 (26%) among 354 tree species belonging to EM genera. In addition, 195 fungal taxa were identified using morphological descriptions and sequencing of the ML5/ML6 fragment of sporocarps and ECMs from West Africa. Analyses of the belowground EM fungal communities mostly based on fungal internal transcribed spacer sequences of ECMs from Continental Africa, Madagascar and the Seychelles also revealed more than 350 putative species of EM fungi belonging mainly to 18 phylogenetic lineages. As in temperate forests, the /russula-lactarius and /tomentella-thelephora lineages dominated EM fungal flora in tropical Africa. A low level of host preference and dominance of multi-host fungal taxa on different African adult tree species and their seedlings were revealed, suggesting a potential for the formation of common ectomycorrhizal networks. Moreover, the EM inoculum potential in terms of types and density of propagules (spores, sclerotia, EM root fragments and fragments of mycelia strands) in the soil allowed opportunistic root colonisation as well as long-term survival in the soil during the dry season. These are important characteristics when choosing an EM fungus for field application. In this respect, Thelephoroid fungal sp. XM002, an efficient and competitive broad host range EM fungus, possessed these characteristics and appeared to be a good candidate for artificial inoculation of Caesalps and Phyllanthaceae seedlings in nurseries. However, further efforts should be made to assess the genetic and functional diversity of African EM fungi as well as the EM status of unstudied plant species and to strengthen the use of efficient and competitive EM fungi to improve production of ecologically and economically important African multipurpose trees in plantations.
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              Genetic diversity of ectomycorrhizal Basidiomycetes from African and Indian tropical rain forests.

              Ectomycorrhizal (ECM) fungi have a worldwide distribution. However, the ecology of tropical ECM fungi is poorly documented, limiting our understanding of the symbiotic associations between tropical plants and fungi. ECM Basidiomycete diversity was investigated for the first time in two tropical rain forests in Africa (Western Upper Guinea) and in Asia (Western Ghats, India), using a fragment of the mitochondrial large subunit rRNA gene to type 140 sporocarps and 54 ectomycorrhizas. To evaluate taxonomic diversity, phylogenetic analyses were performed, and 40 sequences included from identified European specimens were used as taxonomic benchmarks. Five clades were recovered corresponding to six taxonomic groups: boletoids, sclerodermatoids, russuloids, thelephoroids, and a clade grouping the Amanitaceae and Tricholomataceae families. Our results revealed that the Russulaceae species display a great diversity with several putative new species, especially in Guinea. Other taxonomic issues at family/section levels are also briefly discussed. This study provides preliminary insights into taxonomic diversity, ECM status, and biogeographic patterns of ECM fungi in tropical two rain forest ecosystems, which appear to be as diverse as in temperate and boreal forests.
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                Author and article information

                Journal
                IMA Fungus
                IMA Fungus
                IMA Fungus
                IMA Fungus
                International Mycological Association
                2210-6340
                2210-6359
                8 May 2014
                June 2014
                : 5
                : 1
                : 39-49
                Affiliations
                [1 ]Département de Botanique et Écologie Végétale, Faculté des Sciences, Université de Lomé BP 1515, Lomé, Togo;
                [2 ]Department Biology I, Organismic Biology: Mycology, Ludwig-Maximilians-Universität München, Menzinger Str. 67, 80638 München, Germany.
                [3 ]Faculty of Agronomy, University of Parakou, BP 123, Parakou, Benin.
                [4 ]National Botanic Garden of Belgium, Department of Cryptogamy (Bryophyta & Thallophyta) Domein van Bouchout, B-1860 Meise, Belgium.
                [5 ]Ghent University Department of Biology, Research Group Mycology, K.L. Ledeganckstraat 35 B - 9000 Ghent, Belgium.
                Author notes
                corresponding author e-mail: mlamega@ 123456yahoo.com
                Article
                10.5598/imafungus.2014.05.01.05
                4107895
                25083405
                cdde5e87-0830-410d-8b95-f9e95a9fa427
                © 2014 International Mycological Association

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                History
                : 7 February 2014
                : 28 April 2014
                Categories
                Article

                Plant science & Botany
                distribution,ecology,ectomycorrhizas,lactifluus,molecular phylogeny,tropical africa

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