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      Electrophysiological assessment of plant status outside a Faraday cage using supervised machine learning

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          Abstract

          Living organisms have evolved complex signaling networks to drive appropriate physiological processes in response to changing environmental conditions. Amongst them, electric signals are a universal method to rapidly transmit information. In animals, bioelectrical activity measurements in the heart or the brain provide information about health status. In plants, practical measurements of bioelectrical activity are in their infancy and transposition of technology used in human medicine could therefore, by analogy provide insight about the physiological status of plants. This paper reports on the development and testing of an innovative electrophysiological sensor that can be used in greenhouse production conditions, without a Faraday cage, enabling real-time electric signal measurements. The bioelectrical activity is modified in response to water stress conditions or to nycthemeral rhythm. Furthermore, the automatic classification of plant status using supervised machine learning allows detection of these physiological modifications. This sensor represents an efficient alternative agronomic tool at the service of producers for decision support or for taking preventive measures before initial visual symptoms of plant stress appear.

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          Most cited references31

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          Electrical signals and their physiological significance in plants.

          Electrical excitability and signalling, frequently associated with rapid responses to environmental stimuli, are well known in some algae and higher plants. The presence of electrical signals, such as action potentials (AP), in both animal and plant cells suggested that plant cells, too, make use of ion channels to transmit information over long distances. In the light of rapid progress in plant biology during the past decade, the assumption that electrical signals do not only trigger rapid leaf movements in 'sensitive' plants such as Mimosa pudica or Dionaea muscipula, but also physiological processes in ordinary plants proved to be correct. Summarizing recent progress in the field of electrical signalling in plants, the present review will focus on the generation and propagation of various electrical signals, their ways of transmission within the plant body and various physiological effects.
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            Rapid, Long-Distance Electrical and Calcium Signaling in Plants.

            Plants integrate activities throughout their bodies using long-range signaling systems in which stimuli sensed by just a few cells are translated into mobile signals that can influence the activities in distant tissues. Such signaling can travel at speeds well in excess of millimeters per second and can trigger responses as diverse as changes in transcription and translation levels, posttranslational regulation, alterations in metabolite levels, and even wholesale reprogramming of development. In addition to the use of mobile small molecules and hormones, electrical signals have long been known to propagate throughout the plant. This electrical signaling network has now been linked to waves of Ca(2+) and reactive oxygen species that traverse the plant and trigger systemic responses. Analysis of cell type specificity in signal propagation has revealed the movement of systemic signals through specific cell types, suggesting that a rapid signaling network may be hardwired into the architecture of the plant.
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              Plant ion channels: gene families, physiology, and functional genomics analyses.

              Distinct potassium, anion, and calcium channels in the plasma membrane and vacuolar membrane of plant cells have been identified and characterized by patch clamping. Primarily owing to advances in Arabidopsis genetics and genomics, and yeast functional complementation, many of the corresponding genes have been identified. Recent advances in our understanding of ion channel genes that mediate signal transduction and ion transport are discussed here. Some plant ion channels, for example, ALMT and SLAC anion channel subunits, are unique. The majority of plant ion channel families exhibit homology to animal genes; such families include both hyperpolarization- and depolarization-activated Shaker-type potassium channels, CLC chloride transporters/channels, cyclic nucleotide-gated channels, and ionotropic glutamate receptor homologs. These plant ion channels offer unique opportunities to analyze the structural mechanisms and functions of ion channels. Here we review gene families of selected plant ion channel classes and discuss unique structure-function aspects and their physiological roles in plant cell signaling and transport.
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                Author and article information

                Contributors
                qnoctnandaniel.tran@agroscope.admin.ch
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                19 November 2019
                19 November 2019
                2019
                : 9
                : 17073
                Affiliations
                [1 ]ISNI 0000 0004 4681 910X, GRID grid.417771.3, Institute for Plant Production Sciences, , Agroscope, ; Route des Eterpys 18, CH-1964 Conthey, Switzerland
                [2 ]GRID grid.435142.5, University of Applied Sciences and Arts of Western Switzerland (HES-SO), Haute Ecole d’Ingénierie et de Gestion du Canton de Vaud (HEIG-VD), ; Route de Cheseaux 1, CH-1401 Yverdon-les-Bains, Switzerland
                [3 ]Vivent SÁRL, Chemin de Varmey 1, CH-1299 Crans-près-Céligny, Switzerland
                [4 ]University of Applied Sciences and Arts of Western Switzerland (HES-SO), Haute Ecole d’Ingénierie et d’Architecture Fribourg (HEIA-Fr), Bd de Pérolles 80, CH-1700 Fribourg, Switzerland
                Author information
                http://orcid.org/0000-0001-7069-5109
                http://orcid.org/0000-0003-1086-5668
                Article
                53675
                10.1038/s41598-019-53675-4
                6864072
                31745185
                ced89df6-b04e-4902-bdcd-b5222c6a413e
                © The Author(s) 2019

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 5 April 2019
                : 5 November 2019
                Funding
                Funded by: Swiss Innovation Agency, Innosuisse, 27661.1 PFLS-LS
                Categories
                Article
                Custom metadata
                © The Author(s) 2019

                Uncategorized
                sensors and probes,computational biology and bioinformatics,plant sciences
                Uncategorized
                sensors and probes, computational biology and bioinformatics, plant sciences

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